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The map label for this gene is ydfA [H]

Identifier: 170681288

GI number: 170681288

Start: 1178695

End: 1178850

Strand: Reverse

Name: ydfA [H]

Synonym: EcSMS35_1158

Alternate gene names: 170681288

Gene position: 1178850-1178695 (Counterclockwise)

Preceding gene: 170683838

Following gene: 170681832

Centisome position: 23.26

GC content: 48.72

Gene sequence:

>156_bases
ATGGATACTATCGATCTTGGCAACAGCGAATCTCTGGTATGTGGTGTGTTCCCCAACCAGGACGGCACATTCACCGCCAT
GACGTATACCAGAAGTAAAACGTTTAAAACCGAATCTGACGCGCGTCGCTGGCTGGAAAGAAATTCAGGTGAGTGA

Upstream 100 bases:

>100_bases
CAACATTCATGAGAAAACTAAATTACCACCCATCAAGACACCGCACGGTGTTCTCAGCAAACAGTTCCGCTACCCGGCGT
TAAGGGGTAATGAGGTCAGC

Downstream 100 bases:

>100_bases
TATGGATTTCGACGCAATCATGGAAAAGGCTTACGAAGAATACTTCGAAGACCTTGCCGAAGGCGAAGAAGCTCTCAGCT
TCAGTGAGTTTAAACAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTESDARRWLERNSGE

Sequences:

>Translated_51_residues
MDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTESDARRWLERNSGE
>Mature_51_residues
MDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTESDARRWLERNSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydaF [H]

Homologues:

Organism=Escherichia coli, GI1787854, Length=51, Percent_Identity=90.1960784313726, Blast_Score=98, Evalue=1e-22,
Organism=Escherichia coli, GI87081886, Length=49, Percent_Identity=81.6326530612245, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009821
- ProDom:   PD019047 [H]

Pfam domain/function: PF07151 DUF1391 [H]

EC number: NA

Molecular weight: Translated: 5764; Mature: 5764

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTESDARRWLERNSGE
CCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTIDLGNSESLVCGVFPNQDGTFTAMTYTRSKTFKTESDARRWLERNSGE
CCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]