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The map label for this gene is rnfH [H]

Identifier: 170681237

GI number: 170681237

Start: 2849572

End: 2849862

Strand: Reverse

Name: rnfH [H]

Synonym: EcSMS35_2770

Alternate gene names: 170681237

Gene position: 2849862-2849572 (Counterclockwise)

Preceding gene: 170683083

Following gene: 170681212

Centisome position: 56.23

GC content: 51.2

Gene sequence:

>291_bases
GTGCCAGGTAAAATTGCCGTTGAGGTGGCTTATGCGCTACCTGAGAAGCAGTACCTGCAGCGTGTGACGCTGCAGGAGGG
TGCGACGGTTGAAGAAGCTATTCGCGCCAGTGGCTTGCTGGAATTGCGTACCGATATCGATTTAACTAAAAACAAAGTCG
GCATTTACAGCCGTCCGGCCAAACTGAGCGATACGGTGCATGATGGCGATCGGGTGGAGATTTATCGTCCTCTCATTGCC
GATCCGAAAGAGCTTCGCAGGCAACGAGCAGAAAAATCAGCGAATAAATAA

Upstream 100 bases:

>100_bases
TTTACCAATAAGTTGATTGAACTCGCCTTTGGTCGCGTGTTTAAAGAGCTGGCGGCTAATATGGTCCAGGCTTTTACGGT
TCGTGCGAAAGAGGTTTACA

Downstream 100 bases:

>100_bases
CAGACAGAAAAAAGGTGCTCATTGAGCACCTTTTTTAACCTCTTTGAGAGCAACTTTATTATTAGTTACCACTCAGCGCA
GGTTTGTTATCAATGTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDTVHDGDRVEIYRPLIA
DPKELRRQRAEKSANK

Sequences:

>Translated_96_residues
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDTVHDGDRVEIYRPLIA
DPKELRRQRAEKSANK
>Mature_95_residues
PGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDTVHDGDRVEIYRPLIAD
PKELRRQRAEKSANK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=96, Percent_Identity=98.9583333333333, Blast_Score=192, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 10804; Mature: 10672

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA
CCCCEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
KLSDTVHDGDRVEIYRPLIADPKELRRQRAEKSANK
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA
CCCEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
KLSDTVHDGDRVEIYRPLIADPKELRRQRAEKSANK
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA