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The map label for this gene is ndpA [C]

Identifier: 170680719

GI number: 170680719

Start: 2368600

End: 2369607

Strand: Reverse

Name: ndpA [C]

Synonym: EcSMS35_2335

Alternate gene names: 170680719

Gene position: 2369607-2368600 (Counterclockwise)

Preceding gene: 170682652

Following gene: 170681582

Centisome position: 46.75

GC content: 52.38

Gene sequence:

>1008_bases
ATGAGTCTGGATATCAACCAGATTGCTCTGCACCAGCTTATCAAGCGTGATGAGCAGAACCTTGAGCTGGTGTTGCGCGA
TTCATTGCTGGAACCGACAGAAACCGTCGTTGAGATGGTGGCAGAACTGCATCGGGTCTATAGCGCCAAAAATAAAGCTT
ACGGCTTGTTTAGCGAAGAGAGTGAACTGGCGCAGACGCTGCGCTTACAGCGTCAGGGCGAAGAGGACTTTCTGGCATTT
AGCCGCGCGGCAACCGGTCGCCTGCGTGACGAATTAGCGAAATATCCTTTTGCTGACGGTGGATTCGTGCTGTTTTGCCA
CTATCGCTATCTGGCGGTGGAGTATTTGCTGGTGGCAGTTCTGAGCAATCTGAGCAGTATGCGCGTTAACGAAAATCTCG
ACATCAACCCAACTCATTATCTTGATATCAATCATGCGGATATTGTTGCGCGTATCGATTTAACCGAGTGGGAAACCAAT
CCAGAGTCGACCCGCTATCTCACTTTCCTGAAAGGGCGAGTAGGGCGCAAAGTGGCGGATTTCTTTATGGATTTCCTCGG
TGCCAGCGAAGGGTTAAACGCGAAAGCGCAAAACCGTGGGCTGTTGCAAGCGGTCGATGATTTCACTGCCGAAGCACAAC
TGGATAAAGCAGAGCGACAGAACGTGCGCCAGCAGGTTTATAGCTACTGTAATGAGCAGCTGCAGGCAGGTGAAGAGATT
GAACTGGAATCGCTGTCGAAAGAGCTGGCTGGCGTCAGCGAAGTGAGCTTCACGGAGTTTGCGGCTGAAAAAGGCTACGA
ACTGGAAGAGAGCTTCCCGGCAGACCGTAGCACACTGCGTCAGTTGACGAAGTTTGCCGGTAGCGGCGGTGGCTTGACTA
TTAACTTTGATGCGATGCTGTTAGGTGAACGCATCTTCTGGGATCCGGCGACCGATACCCTGACCATTAAAGGCACGCCG
CCGAACCTGCGTGACCAATTGCAGCGCCGGACGTCTGGCGGCAATTAA

Upstream 100 bases:

>100_bases
ATTCTCGTTACGCTGCCTTCTGTAAAATGACCGCCATCTTTTATTGCGTCGCTTAACCGGCGGTGGTTGAATACCGCCCG
GTCTTAAAGGAGAGTTTATC

Downstream 100 bases:

>100_bases
TCGGTTTTGTGTTCTGAATGCCAGATGCGGCGTGAACGCCTTATCTGGCCTGCAAAAAATAGCAATACCGTAATCAGGCA
TAATTTGCAGAGACAAAAAA

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGN

Sequences:

>Translated_335_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGN
>Mature_334_residues
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFS
RAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP
ESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIE
LESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPP
NLRDQLQRRTSGGN

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=335, Percent_Identity=99.7014925373134, Blast_Score=685, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 37824; Mature: 37693

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML
CHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE
CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML
CHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA