| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yghG [H]
Identifier: 170680581
GI number: 170680581
Start: 3321184
End: 3321594
Strand: Reverse
Name: yghG [H]
Synonym: EcSMS35_3249
Alternate gene names: 170680581
Gene position: 3321594-3321184 (Counterclockwise)
Preceding gene: 170680076
Following gene: 170681120
Centisome position: 65.54
GC content: 44.04
Gene sequence:
>411_bases ATGTCGATAAAACAAATGCCAGGGAGGGTATTAATATCGCTATTGTTGAGCGTTACAGGATTATTAAGTGGCTGTGCCAG CCATAATGAAAATGCCAGTTTACTGGCGAAAAAACAGGCGCAAAATATCAGCCAAAACCTGCCGATTAAATCTGCGGGAT ATACCTTAGTGCTGGCACAAAGTAGCGGCACGACGGTAAAAATGACCATTATCAGCGAAGCGGGGACTCAGACCACGCAG ACGCCTGACGCCTTTTTAACCAGCTATCAACGACAAATGTGCAATGACCCAACGGTGAAATTAATGCTCACTGAGGGAAT TAATTACAGCATAACGATTAATGATACACGTACAGGTAACCAGTATCAGCGGAAACTGGATCGTACCACCTGTGGAATAG TCAAAGCATAA
Upstream 100 bases:
>100_bases GTATAGCAACAATTTATCTACAGGCATTGTTTTAATGATAACAACGTCATTATCAAAGTGACATTTTAACTCTTATTAAT AACCTTAGAGATTATTTACC
Downstream 100 bases:
>100_bases CGTCGGGTAGATATAAATTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACAAAAATTCGT CACACTCTTAACCAGAGACA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQ TPDAFLTSYQRQMCNDPTVKLMLTEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
Sequences:
>Translated_136_residues MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQ TPDAFLTSYQRQMCNDPTVKLMLTEGINYSITINDTRTGNQYQRKLDRTTCGIVKA >Mature_135_residues SIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQT PDAFLTSYQRQMCNDPTVKLMLTEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789342, Length=136, Percent_Identity=98.5294117647059, Blast_Score=273, Evalue=4e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016502 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14713; Mature: 14582
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCNDPTVKLMLTEGINYSITINDTRTGN CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCH QYQRKLDRTTCGIVKA HHHHHHHHHHCCEECC >Mature Secondary Structure SIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCNDPTVKLMLTEGINYSITINDTRTGN CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCH QYQRKLDRTTCGIVKA HHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]