| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170680417
Identifier: 170680417
GI number: 170680417
Start: 4416568
End: 4417593
Strand: Reverse
Name: 170680417
Synonym: EcSMS35_4318
Alternate gene names: NA
Gene position: 4417593-4416568 (Counterclockwise)
Preceding gene: 170681446
Following gene: 170679745
Centisome position: 87.16
GC content: 40.45
Gene sequence:
>1026_bases ATGATTACAAATCTTGATTCAATGCCTTCTAATGAGCCTTATTTATGGGCTGATTATATTGAGATATTGGCCTTAACTAA TATCGACAGGTCATTCAGTCGAGGAGACCTATATAGCACACTGCAAGCTCAACCCGAAGCAGTACTAGCTGAAACAGATG AAGCAGAAGAAGAGGGCGTTTATGATGTTGATGATGAAAATGATACGCCTGTACGCAAGAGAACAAAACGAAGTGTTAGT CGAGCATATACTGACAGAAAGTGGAGCTATGCGATAGGCTTCATACGACAACGCATTGATTTATTTGGGGATAGTTACCC TTTTACTTTATCAGAAGACAACGATACTGTAGAGTTACGTGATATATCAGAAAAGCCACTGGAACATTTAGAAAGACTAT ATTTAGCTTTACTAATCTGTGCTAACATAAAATATGTCAACATAATGAGCAGAAGAGAGATAACGCGCAGTTTTGAACTA ATTAGTTTACCTATTTTTGAAAGCCTAATGCCTAGCGGTAGCATAATAAAAGCATGCTGGGCTTCTGGTGGTCAAGCGGC CCCTTACACTGGAACTCTATATAATAAATTTAAGAGTATTGCTTCCGATATCCGTTGCACAGCGAACTTCAAAGAACGAG ATTTCAGTCGAGGAAATAGTGGTGACGGAGGCCTTGACATAATTGCCTGGCATCCAATGGGAGATCAACGAGATGCCATC CCTATTTCTTTTGTTCAGTGTGGCTGTTCTCAAGAAGAGTGGGAAGCGAAGCAGCTTGAGGCCTCACCTGCGATGCTCTA CAGTAAATTCCCCGTAGCTCACCGATGGGCAACTTATTATTTCTTACCTCAAGATCTACGATGGATAGATGGTGAGTGGG CGCATAAAAATAAGTTAGGCGATGCTATTTTTGTTGATCGCCTAAGATTAATCAATTTAACCAGAGCATCTGATAATATT GATCACAGTCAAAATATTAGCTATCTAGATATCATCCTTGATCCTTCCAGCGCGATCGCTGCTTAA
Upstream 100 bases:
>100_bases GAATTAACATTAGAGCATGAAGAGGCTGCATCTGAAATTTTTGAGATGTCAAAAAATATTAGAAATCAGATCAGAAGCAA AAGGGAGGATGATTGAGATT
Downstream 100 bases:
>100_bases TCCCATAAATCTGGAAGGTTTCTAGCAACCGCCTCAAACAATGGAGGCGGTACTGCATTACCTACCACAGTATATTTCAT ATTAATAGAAGCCCGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MITNLDSMPSNEPYLWADYIEILALTNIDRSFSRGDLYSTLQAQPEAVLAETDEAEEEGVYDVDDENDTPVRKRTKRSVS RAYTDRKWSYAIGFIRQRIDLFGDSYPFTLSEDNDTVELRDISEKPLEHLERLYLALLICANIKYVNIMSRREITRSFEL ISLPIFESLMPSGSIIKACWASGGQAAPYTGTLYNKFKSIASDIRCTANFKERDFSRGNSGDGGLDIIAWHPMGDQRDAI PISFVQCGCSQEEWEAKQLEASPAMLYSKFPVAHRWATYYFLPQDLRWIDGEWAHKNKLGDAIFVDRLRLINLTRASDNI DHSQNISYLDIILDPSSAIAA
Sequences:
>Translated_341_residues MITNLDSMPSNEPYLWADYIEILALTNIDRSFSRGDLYSTLQAQPEAVLAETDEAEEEGVYDVDDENDTPVRKRTKRSVS RAYTDRKWSYAIGFIRQRIDLFGDSYPFTLSEDNDTVELRDISEKPLEHLERLYLALLICANIKYVNIMSRREITRSFEL ISLPIFESLMPSGSIIKACWASGGQAAPYTGTLYNKFKSIASDIRCTANFKERDFSRGNSGDGGLDIIAWHPMGDQRDAI PISFVQCGCSQEEWEAKQLEASPAMLYSKFPVAHRWATYYFLPQDLRWIDGEWAHKNKLGDAIFVDRLRLINLTRASDNI DHSQNISYLDIILDPSSAIAA >Mature_341_residues MITNLDSMPSNEPYLWADYIEILALTNIDRSFSRGDLYSTLQAQPEAVLAETDEAEEEGVYDVDDENDTPVRKRTKRSVS RAYTDRKWSYAIGFIRQRIDLFGDSYPFTLSEDNDTVELRDISEKPLEHLERLYLALLICANIKYVNIMSRREITRSFEL ISLPIFESLMPSGSIIKACWASGGQAAPYTGTLYNKFKSIASDIRCTANFKERDFSRGNSGDGGLDIIAWHPMGDQRDAI PISFVQCGCSQEEWEAKQLEASPAMLYSKFPVAHRWATYYFLPQDLRWIDGEWAHKNKLGDAIFVDRLRLINLTRASDNI DHSQNISYLDIILDPSSAIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38843; Mature: 38843
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNLDSMPSNEPYLWADYIEILALTNIDRSFSRGDLYSTLQAQPEAVLAETDEAEEEGV CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCHHHCCC YDVDDENDTPVRKRTKRSVSRAYTDRKWSYAIGFIRQRIDLFGDSYPFTLSEDNDTVELR EECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEE DISEKPLEHLERLYLALLICANIKYVNIMSRREITRSFELISLPIFESLMPSGSIIKACW CCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHEECHHHHHHCCCCHHHHHHH ASGGQAAPYTGTLYNKFKSIASDIRCTANFKERDFSRGNSGDGGLDIIAWHPMGDQRDAI CCCCCCCCCCCHHHHHHHHHHHHCEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCC PISFVQCGCSQEEWEAKQLEASPAMLYSKFPVAHRWATYYFLPQDLRWIDGEWAHKNKLG CCHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHEEEEEEECCCCCEECCCCHHHHHHCC DAIFVDRLRLINLTRASDNIDHSQNISYLDIILDPSSAIAA CHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCHHHCC >Mature Secondary Structure MITNLDSMPSNEPYLWADYIEILALTNIDRSFSRGDLYSTLQAQPEAVLAETDEAEEEGV CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCHHHCCC YDVDDENDTPVRKRTKRSVSRAYTDRKWSYAIGFIRQRIDLFGDSYPFTLSEDNDTVELR EECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEE DISEKPLEHLERLYLALLICANIKYVNIMSRREITRSFELISLPIFESLMPSGSIIKACW CCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHEECHHHHHHCCCCHHHHHHH ASGGQAAPYTGTLYNKFKSIASDIRCTANFKERDFSRGNSGDGGLDIIAWHPMGDQRDAI CCCCCCCCCCCHHHHHHHHHHHHCEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCC PISFVQCGCSQEEWEAKQLEASPAMLYSKFPVAHRWATYYFLPQDLRWIDGEWAHKNKLG CCHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHEEEEEEECCCCCEECCCCHHHHHHCC DAIFVDRLRLINLTRASDNIDHSQNISYLDIILDPSSAIAA CHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA