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The map label for this gene is yfcO [H]

Identifier: 170680246

GI number: 170680246

Start: 2538053

End: 2538892

Strand: Reverse

Name: yfcO [H]

Synonym: EcSMS35_2491

Alternate gene names: 170680246

Gene position: 2538892-2538053 (Counterclockwise)

Preceding gene: 170679590

Following gene: 170681331

Centisome position: 50.09

GC content: 45.95

Gene sequence:

>840_bases
ATGAAAAAATGGATGATGTTTTTCGCGAGCCTGATATTGCTCGTAATGAGTGTAGGTACGCCAAAGAGTTATGCCAGGGA
TAAACTCACCAGCGCAACTTTTGATAGTGTGAAAATTTACTATGGGATGGGGAGAGCAGGTTTCACCACAGGAGCCTTAC
ATGTCACTGTGTTAACCCCAGGCGAGGTTGCCTATGGGGTATACAATACTACCGGGTATATAGGCACTGACGCGAGGGTC
GTTTCATGGACGGGGTCTGGCCCTGCGCCAACGTTGACTCTTGTTGACTATAGTAGCACTGATAACTCGTTTTGCCCTGG
GATAAATACGACGCTGTTTCGATGCGCATATGAGACATTTAAAGTTACCGTTCAATCTGACAATTATGGCTGTCCGTGGA
TCGCCTCTTTTTATGAGGTATCAGATCAACATGCATATGGAATATATACTGGCCCAACGGATCATGCTACGGCATGCCCA
ACGATTCCGGTGACTTCATTTGATATTTCGTGGAATGAGAATTATGTCAGCCATAGTAAAGCGTTGCAGTTACAGTCCAA
TGGCTCGACCATCACCACCACGCTTTCGACCTACCTGATGCAAGACGGCAAACTCTGTGATGGCAGCGTTTTTGATAACA
GAGGAGCATACTGCCGCGTGGTCTCGGAACTGTTAACCTTTACCTCTTACGGTTGCGATAAATCGACAGTAACGGTTTCC
CCTACACGTCATCCAGTAACGGATAAACAACTGCACGATATTGTGGTGAAGGTGAATACCAGTAGCCGACAACCGATTGA
TTCTACGTGTCGTTTTCAGTATGTATTGAATGAATTGTAG

Upstream 100 bases:

>100_bases
ACTCTCAACTTCAATGCCTGGTTACAGACAAAAAGTGGGCGGGATGTGACGCCCGGTGATTTCAGCGCCACGGCGACGGC
AACCTTTGAGTATTTTTAAG

Downstream 100 bases:

>100_bases
TGACTCTGGTACGGATGGTCGGGTATCGGCCATCCGTTATGTCATGCGGTCATCCAGTTTTTTAGAATATTCGCCACCAC
GGGAGCGAAAGGTGCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKKWMMFFASLILLVMSVGTPKSYARDKLTSATFDSVKIYYGMGRAGFTTGALHVTVLTPGEVAYGVYNTTGYIGTDARV
VSWTGSGPAPTLTLVDYSSTDNSFCPGINTTLFRCAYETFKVTVQSDNYGCPWIASFYEVSDQHAYGIYTGPTDHATACP
TIPVTSFDISWNENYVSHSKALQLQSNGSTITTTLSTYLMQDGKLCDGSVFDNRGAYCRVVSELLTFTSYGCDKSTVTVS
PTRHPVTDKQLHDIVVKVNTSSRQPIDSTCRFQYVLNEL

Sequences:

>Translated_279_residues
MKKWMMFFASLILLVMSVGTPKSYARDKLTSATFDSVKIYYGMGRAGFTTGALHVTVLTPGEVAYGVYNTTGYIGTDARV
VSWTGSGPAPTLTLVDYSSTDNSFCPGINTTLFRCAYETFKVTVQSDNYGCPWIASFYEVSDQHAYGIYTGPTDHATACP
TIPVTSFDISWNENYVSHSKALQLQSNGSTITTTLSTYLMQDGKLCDGSVFDNRGAYCRVVSELLTFTSYGCDKSTVTVS
PTRHPVTDKQLHDIVVKVNTSSRQPIDSTCRFQYVLNEL
>Mature_279_residues
MKKWMMFFASLILLVMSVGTPKSYARDKLTSATFDSVKIYYGMGRAGFTTGALHVTVLTPGEVAYGVYNTTGYIGTDARV
VSWTGSGPAPTLTLVDYSSTDNSFCPGINTTLFRCAYETFKVTVQSDNYGCPWIASFYEVSDQHAYGIYTGPTDHATACP
TIPVTSFDISWNENYVSHSKALQLQSNGSTITTTLSTYLMQDGKLCDGSVFDNRGAYCRVVSELLTFTSYGCDKSTVTVS
PTRHPVTDKQLHDIVVKVNTSSRQPIDSTCRFQYVLNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=281, Percent_Identity=43.4163701067616, Blast_Score=239, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 30660; Mature: 30660

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWMMFFASLILLVMSVGTPKSYARDKLTSATFDSVKIYYGMGRAGFTTGALHVTVLTP
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEECEEEEEEECC
GEVAYGVYNTTGYIGTDARVVSWTGSGPAPTLTLVDYSSTDNSFCPGINTTLFRCAYETF
CCEEEEEEECCEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHEEEEEE
KVTVQSDNYGCPWIASFYEVSDQHAYGIYTGPTDHATACPTIPVTSFDISWNENYVSHSK
EEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHCCCE
ALQLQSNGSTITTTLSTYLMQDGKLCDGSVFDNRGAYCRVVSELLTFTSYGCDKSTVTVS
EEEEECCCCEEEEEHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEC
PTRHPVTDKQLHDIVVKVNTSSRQPIDSTCRFQYVLNEL
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKWMMFFASLILLVMSVGTPKSYARDKLTSATFDSVKIYYGMGRAGFTTGALHVTVLTP
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEECEEEEEEECC
GEVAYGVYNTTGYIGTDARVVSWTGSGPAPTLTLVDYSSTDNSFCPGINTTLFRCAYETF
CCEEEEEEECCEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHEEEEEE
KVTVQSDNYGCPWIASFYEVSDQHAYGIYTGPTDHATACPTIPVTSFDISWNENYVSHSK
EEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHCCCE
ALQLQSNGSTITTTLSTYLMQDGKLCDGSVFDNRGAYCRVVSELLTFTSYGCDKSTVTVS
EEEEECCCCEEEEEHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCEEEEC
PTRHPVTDKQLHDIVVKVNTSSRQPIDSTCRFQYVLNEL
CCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]