| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
Click here to switch to the map view.
The map label for this gene is phnB [H]
Identifier: 170680128
GI number: 170680128
Start: 4670746
End: 4671189
Strand: Reverse
Name: phnB [H]
Synonym: EcSMS35_4572
Alternate gene names: 170680128
Gene position: 4671189-4670746 (Counterclockwise)
Preceding gene: 170682790
Following gene: 170683786
Centisome position: 92.16
GC content: 50.68
Gene sequence:
>444_bases ATGCCGTTAAGTCCCTACCTCTCTTTTGCCGGTAACTGTGCCGACGCAATTGCTTATTATCAACGTACGTTGGGCGCTGA ACTGCTCTATAAAATCAGCTTCGGCGAAATGCCAAAATCAGCGCAGGATAGCGCCGAGAACTGCCCTTCCGGAATGCAAT TTCCCGATACCGCCATCGCTCATGCCAACGTGCGCATTGCAGGAAGCGACATCATGATGAGCGATGCTATACCGTCAGGA AAAGCCAGCTACTCCGGCTTTACGCTGGTGCTCGATTCGCAACAGGTCGAAGAAGGAAAACGCTGGTTTGACAACCTTGC CGCTAACGGAAAAATCGAAATGGCCTGGCAGGAAACTTTCTGGGCGCATGGCTTCGGCAAAGTCACCGATAAATTTGGCG TACCGTGGATGATTAATGTCGTCAAACAACAACCAACGCACTAA
Upstream 100 bases:
>100_bases CTGCCTGATGCGACGCTGACCGCGTCTTATCAGGCTTCCCTCTCATCTGTATAAATTTCGAACTACACTTAACTGGCTTC TCTTAACTGAGGTCACCATC
Downstream 100 bases:
>100_bases CCCGCCGGGAGGGCCGCCCTCCCGCACTGTCATCGAAATCTCGTTAACTCTTCATCCGTTAGTCACTTTTAGTTAACAAA ATCGTCACAATAATCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG KASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTH
Sequences:
>Translated_147_residues MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG KASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTH >Mature_146_residues PLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGK ASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTH
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=147, Percent_Identity=97.9591836734694, Blast_Score=305, Evalue=9e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16146; Mature: 16015
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA CCCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE HANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF ECEEEEECCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHH WAHGFGKVTDKFGVPWMINVVKQQPTH HHCCCCHHHHCCCCCCEEHHHHCCCCC >Mature Secondary Structure PLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA CCCCCHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEE HANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF ECEEEEECCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHH WAHGFGKVTDKFGVPWMINVVKQQPTH HHCCCCHHHHCCCCCCEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]