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The map label for this gene is ygiV [H]

Identifier: 170679982

GI number: 170679982

Start: 3390605

End: 3391087

Strand: Reverse

Name: ygiV [H]

Synonym: EcSMS35_3312

Alternate gene names: 170679982

Gene position: 3391087-3390605 (Counterclockwise)

Preceding gene: 170682123

Following gene: 170680624

Centisome position: 66.91

GC content: 52.59

Gene sequence:

>483_bases
ATGACAAACCTGACACTGGATGTAAATATTATCGATTTCCCATCAATCCCTGTGGCGATGTTGCCGCACCGCTGTAGCCC
TGAGTTGCTCAACTACAGTGTGGCGAAATTTATCATGTGGCGTAAAGAGACGGGGCTTTCTCCTGTTAACCAAAGCCAGA
CTTTTGGCGTCGCCTGGGACGACCCTGCCACCACCGCACCAGAAGCGTTTCGCTTTGATATCTGCGGCAGCGTTAGCGAA
CCGATCCCCGATAATCGTTATGGCGTAAGTAATGGTGAACTTACCGGTGGACGTTATGCTGTGGCCCGCCATGTTGGCGA
GCTGGACGATATTTCACACACGATATGGGGCATCATTCGCCACTGGCTTCCGGCAAGCGGCGAAAAAATGCGCAAGGCCC
CGATCCTGTTTCACTACACCAATCTTGCCGAAGGGATGACAGAGCAGCGACTGGAAACAGATGTTTATGTGCCGTTGGCG
TGA

Upstream 100 bases:

>100_bases
AATTCTGTTGAAATTGACGTCAAACAGATCCGCAAAGTAAATCCGTAATTGTTACCGCTCCCGGGACACGTTCCCGGGAA
TAATTTCGCAGGGAGGCAAA

Downstream 100 bases:

>100_bases
TGAAGAATCTTTACCGGAGTGTGAGCCAAATCACTCGCGATAAGTTTGAGCGAACAATGCCACAGGCGTATTGTTGTTGG
GCTTATAATTTCTCCGGTAA

Product: transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSE
PIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA

Sequences:

>Translated_160_residues
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSE
PIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
>Mature_159_residues
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEP
IPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA

Specific function: Represses expression of mcbR [H]

COG id: COG3449

COG function: function code L; DNA gyrase inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994918, Length=160, Percent_Identity=98.75, Blast_Score=333, Evalue=4e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 17874; Mature: 17742

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
HHCCCCCCCHHCCCEEEEECCHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
TNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD
CCEEEEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
DPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
HWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
HHCCCCCCCHHCCCEEEEECCHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]