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The map label for this gene is yihT [H]

Identifier: 170679919

GI number: 170679919

Start: 4366381

End: 4367259

Strand: Reverse

Name: yihT [H]

Synonym: EcSMS35_4266

Alternate gene names: 170679919

Gene position: 4367259-4366381 (Counterclockwise)

Preceding gene: 170680542

Following gene: 170683291

Centisome position: 86.17

GC content: 52.33

Gene sequence:

>879_bases
ATGAATAAGTACACCATCAACGACATTACGCGTGCATCGGGCGGTTTTGCCATGCTGGCGGTCGATCAGCGCGAAGCCAT
GCGCATGATGTTTGCCGCGGCTGGCGCACCCGCTCCAGTAGCCGATAGCGTTTTAACTGATTTCAAAGTTAACGCCGCGA
AGACTCTTTCACCTTATGCATCGGCGATTCTGGTAGATCAACAATTCTGCTACCGCCAGGTGGTTGAGCAAAACGCAATT
GCCAAAAGCTGCGCCATGATCGTCGCTGCCGATGAATTTATTCCAGGCAACGGTATTCCGGTGGATAGCGTAGTCATTGA
CCGCAAAATCAACCCGCAACAAATCAAACAAGACGGTGGCAAAGCCTTAAAACTGCTGGTGCTGTGGCGTAGTGATGAAG
ATGCGCAGCAACGCCTGGATATGGTGAAAGAGTTCAATGAACTGTGCCACTCACACGGTCTGGTGAGCATCATTGAGCCA
GTCGTTCGTCCGCCGCGTCGTGGCGATAAATTCGATCGCGAACAAGCAATCATCGATGCAGCCAAAGAGCTGGGTGATAG
CGGTGCAGACCTCTACAAAGTTGAAATGCCGCTTTACGGCAAAGGTCCGCAACAAGAGCTTCTCAGTGCTTCACAACGTT
TGAATGACCATATCAATATGCCGTGGGTGATCCTCTCTTCCGGTGTCGACGAAAAACTGTTCCCGCGTGCCGTACGCGTG
GCAATGACGGCGGGCGCATCGGGATTCCTTGCAGGCCGTGCAGTCTGGGCATCGGTCGTCGGTTTACCAGACAACGAGTT
GATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCCGTTAA

Upstream 100 bases:

>100_bases
GCGGTCGCCAGGACTGGTCCGCCATTCTGGAGCAGGTCCGTGTCAGTGCCGGGATGACTGCCAAAGTAAAAATGTAACGA
CTGGATAAAGGAATAAATGA

Downstream 100 bases:

>100_bases
GATGGGGATACAAAAATGAAATGGTTTAACACCTTAAGTCACAACCGTTGGCTGGAACAGGAAACCGATCGCATCTTTGA
TTTTGGTAAAAATTCCGTGG

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKTLSPYASAILVDQQFCYRQVVEQNAI
AKSCAMIVAADEFIPGNGIPVDSVVIDRKINPQQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEP
VVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLSASQRLNDHINMPWVILSSGVDEKLFPRAVRV
AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR

Sequences:

>Translated_292_residues
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKTLSPYASAILVDQQFCYRQVVEQNAI
AKSCAMIVAADEFIPGNGIPVDSVVIDRKINPQQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEP
VVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLSASQRLNDHINMPWVILSSGVDEKLFPRAVRV
AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR
>Mature_292_residues
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKTLSPYASAILVDQQFCYRQVVEQNAI
AKSCAMIVAADEFIPGNGIPVDSVVIDRKINPQQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEP
VVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLSASQRLNDHINMPWVILSSGVDEKLFPRAVRV
AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR

Specific function: Unknown

COG id: COG3684

COG function: function code G; Tagatose-1,6-bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase lacD family [H]

Homologues:

Organism=Escherichia coli, GI1790314, Length=292, Percent_Identity=98.972602739726, Blast_Score=590, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017291
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.1.-.- [C]

Molecular weight: Translated: 32012; Mature: 32012

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKTLSPYA
CCCEECCHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
SAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPQQIKQDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCC
KALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDA
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
AKELGDSGADLYKVEMPLYGKGPQQELLSASQRLNDHINMPWVILSSGVDEKLFPRAVRV
HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKTLSPYA
CCCEECCHHHHCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
SAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPQQIKQDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCC
KALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDA
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
AKELGDSGADLYKVEMPLYGKGPQQELLSASQRLNDHINMPWVILSSGVDEKLFPRAVRV
HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
AMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]