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The map label for this gene is ybhS [H]

Identifier: 170679866

GI number: 170679866

Start: 817815

End: 818948

Strand: Reverse

Name: ybhS [H]

Synonym: EcSMS35_0816

Alternate gene names: 170679866

Gene position: 818948-817815 (Counterclockwise)

Preceding gene: 170680534

Following gene: 170683835

Centisome position: 16.16

GC content: 54.85

Gene sequence:

>1134_bases
ATGAGTAATCCGATCCTGTCCTGGCGTCGCGTGCGGGCACTGTGCGTCAAAGAGACGCGGCAGATCGTTCGCGATCCGAG
TAGCTGGCTGATTGCGGTAGTGATCCCACTGCTACTGCTGTTTATTTTTGGATACGGCATTAACCTCGACTCCAGCAAGC
TGCGGGTCGGGATATTGCTGGAACAGCGTAGCGAAGCGGCGCTGGATTTCACCCACACCATGACCGGTTCGCCCTACATC
GACGCCACCATCAGCGATAACCGTCAGGAACTGATCGCCAAAATGCAGGCGGGGAAAATTCGCGGTCTGGTGGTTATTCC
CGTGGATTTCGCCGAACAGATGGAGCGCGCCAGCGCCACCGCACCGATTCAGGTGATCACCGACGGCAGTGAGCCGAATA
CCGCTAACTTTGTGCAGGGGTATGTCGAAGGGATCTGGCAGATCTGGCAAATGCAGCGAGCGGAGGATAACGGGCAGACT
TTTGAACCGCTTATTGATGTACAAACCCGCTACTGGTTTAACCCGGCGGCGATTAGCCAGCACTTTATTATCCCCGGTGC
GGTGACCATTATCATGACGGTCATCGGCGCGATTCTCACCTCGCTGGTGGTGGCGCGAGAATGGGAACGCGGCACCATGG
AGGCTCTGCTCTCTACGGAGATTACCCGCACGGAACTGCTACTGTGTAAGCTGATCCCTTATTATTTTCTCGGGATGCTG
GCGATGCTGCTGTGTATGCTGGTGTCAGTGTTTATTCTCGGCGTGCCGTATCGTGGGTCACTGCTGATTCTGTTTTTTAT
CTCCAGCCTGTTTTTACTCAGTACCCTGGGGATGGGGCTGCTGATTTCCACGATTACCCGCAACCAGTTCAATGCCGCTC
AGGTCGCTCTGAACGCGGCTTTTCTGCCGTCGATTATGCTTTCCGGCTTTATATTTCAGATAGACAGTATGCCCGCGGTG
ATCCGCGCGGTGACGTACATTATTCCCGCACGTTATTTCGTCAGCACCCTGCAAAGCCTGTTCCTCGCCGGGAATATTCC
GGTGGTACTGGTGGTGAACGTGCTGTTTTTGATCGCTTCGGCGGTGATGTTTATCGGCCTGACGTGGCTGAAAACCAAAC
GTCGGCTGGATTAG

Upstream 100 bases:

>100_bases
GACGATTTGAAAGCGCAGTCGGCCAACGATGAGCAACCCGATCCCACGATGGAGCAAGCCTTTATTCAGTTGATCCACGA
CTGGGATAAGGAGCATGGCA

Downstream 100 bases:

>100_bases
GGAGAAGAGCATGTTTCATCGCTTATGGACGTTAATCCGCAAAGAGTTGCAGTCGCTGCTGCGCGAACCGCAAACCCGCG
CAATTCTGATTTTACCCGTG

Product: ABC-2 type transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYI
DATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERASATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD

Sequences:

>Translated_377_residues
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYI
DATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERASATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAV
IRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD
>Mature_376_residues
SNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYID
ATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERASATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTF
EPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLA
MLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVI
RAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=377, Percent_Identity=99.7347480106101, Blast_Score=758, Evalue=0.0,
Organism=Escherichia coli, GI48994943, Length=338, Percent_Identity=31.6568047337278, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=26.5671641791045, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI226510979, Length=265, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42033; Mature: 41902

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERASAT
ECCCCHHHEEHEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCC
APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECHHHHCC
HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIAS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERASAT
ECCCCHHHEEHEECCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCC
APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECHHHHCC
HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML
CEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIAS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVMFIGLTWLKTKRRLD
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]