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The map label for this gene is yqcA [H]

Identifier: 170679697

GI number: 170679697

Start: 3005786

End: 3006235

Strand: Reverse

Name: yqcA [H]

Synonym: EcSMS35_2930

Alternate gene names: 170679697

Gene position: 3006235-3005786 (Counterclockwise)

Preceding gene: 170682843

Following gene: 170683781

Centisome position: 59.31

GC content: 51.78

Gene sequence:

>450_bases
ATGGCGGAAATTGGTATTTTTGTCGGCACTATGTACGGAAATTCGCTGTTAGTGGCGGAAGAAGCGGAAGCAATTCTGAC
CGCGCAGGGCCACAAAGCAACGGTATTTGAAGATCCTGAATTAAGCGACTGGCTGCCCTATCAGGATAAGTATGTTCTGG
TGGTTACGTCCACGACCGGGCAGGGCGACCTTCCTGATTGCATTGTGCCGCTCTTTCAGGGAATTAAAGATACCCTGGGC
TTCCAGCCGAATCTGCGTTATGGCGTGATTGCGCTCGGCGACAGTAGTTATGTGAATTTCTGCAATGGCGGCAAACAGTT
CGATACCTTGTTGCAGGAACAGAGCGCTCAGCGAGTGGGAGAAATGCTGTTGATTGACGCCAGTGAGAACCCGGAACCGG
AAACGGAATCAAATCCGTGGGTCGAACATTGGGGCACGCTGTTGTCCTGA

Upstream 100 bases:

>100_bases
TTGGCTGGCGGGGTCTGCTTCCTGAAAATGAAAGGGTTGAGTTCAGTGCGCCATCGGGTCAGGATGGAGAGATAAGTTCC
TAATCCAGGGAGAAAACGGT

Downstream 100 bases:

>100_bases
TACGTTCAGCGAGCGGTAAATGCCGTTTTAGCAGTGCTGAATCGAATCTTTTCAGGCAAATGCCAGTAAAAACTGCTTCA
TAGCGCGGATTTTTACTGGC

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDCIVPLFQGIKDTLG
FQPNLRYGVIALGDSSYVNFCNGGKQFDTLLQEQSAQRVGEMLLIDASENPEPETESNPWVEHWGTLLS

Sequences:

>Translated_149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDCIVPLFQGIKDTLG
FQPNLRYGVIALGDSSYVNFCNGGKQFDTLLQEQSAQRVGEMLLIDASENPEPETESNPWVEHWGTLLS
>Mature_148_residues
AEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDCIVPLFQGIKDTLGF
QPNLRYGVIALGDSSYVNFCNGGKQFDTLLQEQSAQRVGEMLLIDASENPEPETESNPWVEHWGTLLS

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=149, Percent_Identity=97.3154362416107, Blast_Score=299, Evalue=6e-83,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=29.5302013422819, Blast_Score=73, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16343; Mature: 16212

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG
CCCEEEEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCC
QGDLPDCIVPLFQGIKDTLGFQPNLRYGVIALGDSSYVNFCNGGKQFDTLLQEQSAQRVG
CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHC
EMLLIDASENPEPETESNPWVEHWGTLLS
CEEEEECCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
AEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG
CCEEEEEEEECCCEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCC
QGDLPDCIVPLFQGIKDTLGFQPNLRYGVIALGDSSYVNFCNGGKQFDTLLQEQSAQRVG
CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHC
EMLLIDASENPEPETESNPWVEHWGTLLS
CEEEEECCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]