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The map label for this gene is yfbK [H]

Identifier: 170079457

GI number: 170079457

Start: 3004227

End: 3005864

Strand: Reverse

Name: yfbK [H]

Synonym: SYNPCC7002_A2872

Alternate gene names: 170079457

Gene position: 3005864-3004227 (Counterclockwise)

Preceding gene: NA

Following gene: 170079455

Centisome position: 99.93

GC content: 51.4

Gene sequence:

>1638_bases
ATGGCCACTTCATCATCTCGTAAACCGTTGTCCCAACGTTCCCTCACCCTCCTCCTCAGTGGTTGTTTGTTAGGGGGACA
GATCCTCGCGGGCTGTCAGATGGCCTCCCAGAGAACTTCAGACACAGGGATGGATGCCATGGCCCCCCAAGTGGCAGAAA
CGGAGTCCATGCCGGTGATGCCAACCCCCGACGGAGAAATTCCCCAGGAAGTGCCGGATCTCTCCCAAGAAGATTACAAC
CTCATCCGTGACAATCCTTTCCAATTGGTGCGCACCGAACCTCTATCTACCTTTGCCCTTGATGTAGATTCTGGAGCCTA
TAGTAATGTCAGGCGCTTTTTAGATGATGGTCAACTTCCCCCTGCCGATGCGGTGCGCTTGGAGGAGATGATTAACTATT
TCACCTACGACTATCCCGCTCCAGACAATCAACCCTTCGCCATCAACACTGAACTCTCCCAAGCCCCCTGGCAACCCCAG
CACCAACTCCTCCGCATTGGTATTAAGGGCCAGGAAATTGAAAATGAAGCCCTTCCCCCCAGCAATTTGGTGTTTCTCTT
TGATGTGTCGGGGTCGATGAATGATCCCGATAAATTGCCTCTGCTGAAATCGGCCTTTCGACTGTTAGTGAATGAATTGC
GCCCGGAGGATCGCGTTTCCATTGTGGTGTATGCCGGGGCAGCGGGTTTAGTCTTGCCCTCGACGTCTGGAGCCGAAAAA
GAAACCATTCTGGCGGCCTTGGATAACTTAGAAGCAGGGGGTTCCACGGCGGGTGGTGAAGGCATTGAATTGGCTTACCA
GGAGGCGGCGGACAATTTCCTCGACAATGGCAACAACCGGATTATCCTGGCCACCGATGGGGATTTTAATGTGGGGATGT
CCAGCGATGCAGAACTAATTCGTCTGATCGAACAAAAGCGGGAACAGGATATTTTTCTGACGGTGCTAGGCTTTGGTACA
GGCAATCTCAAGGATGCCAAGATGGAGCAGCTCGCCAATAACGGTAATGGGAATTACGCTTACATCGACAACATCCTTGA
AGCGAAAAAGGTGCTAGTGACGGAAATGGGCGGCACGCTTTTAACTTTGGCAAAGGATGTGAAAATTCAGGTGGAATTTA
ACCCGACCCAGGTGCAAGCTTATCGTTTGTTGGGTTACGAAAATCGCCTGTTGACAGCCCAAGATTTTAATGACGACACC
AAAGATGCGGGGGAATTGGGGGCTGGCCATACGGTGACGGCTCTCTATGAAATTGTGCCGGTGGGTGTTGACTCGCCCGT
GGAGTTGCCGACGGTGGATGATTTGAAATACCAAGAAACGCAATCCAATTCGGGGAATTTTGCGGGGGAATTGCTGCAAT
TGAAGCTCCGCTATAAACCCCCCACTGGCGATAATTCAGCACTGATCACCCAGGCGATCGCCAATGACAGTAAACCCCTA
GATCAAGCCTCTCCAGATTTTCGATTTGCGGCGGCGGTAGCGGAATTTGGGATGCTATTGCGGGACTCCCCCTACCGTGG
CGAAAGTTCCTTTGATCAAGTTTTAGAACTGGCCCAAGGCAGCAAAGGAGCAGATCCCGAAGGCTATCGCAGTGAATTTA
TCCAACTGGTCAAAACGGCCCAAGCTTTGAAATTTTAA

Upstream 100 bases:

>100_bases
AATCCCCATTGACTCCTGCCGTTACAGTTTTTTGAACCTAGGCGATCGCCCCAAAAGACGGTGTTAGGTTGAAGGTAATT
CTTCTCCTGGAGGTCAGCCC

Downstream 100 bases:

>100_bases
GGAAGAAGGCCGACGCAGTTTTGTGTTCTCCCGTAGGTTGTGGGTTAGGCGATCGCCAAGTGCATAGGGTCTGCTACCCG
GCCACTACATAGCACCACGA

Product: von Willebrand factor type A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MATSSSRKPLSQRSLTLLLSGCLLGGQILAGCQMASQRTSDTGMDAMAPQVAETESMPVMPTPDGEIPQEVPDLSQEDYN
LIRDNPFQLVRTEPLSTFALDVDSGAYSNVRRFLDDGQLPPADAVRLEEMINYFTYDYPAPDNQPFAINTELSQAPWQPQ
HQLLRIGIKGQEIENEALPPSNLVFLFDVSGSMNDPDKLPLLKSAFRLLVNELRPEDRVSIVVYAGAAGLVLPSTSGAEK
ETILAALDNLEAGGSTAGGEGIELAYQEAADNFLDNGNNRIILATDGDFNVGMSSDAELIRLIEQKREQDIFLTVLGFGT
GNLKDAKMEQLANNGNGNYAYIDNILEAKKVLVTEMGGTLLTLAKDVKIQVEFNPTQVQAYRLLGYENRLLTAQDFNDDT
KDAGELGAGHTVTALYEIVPVGVDSPVELPTVDDLKYQETQSNSGNFAGELLQLKLRYKPPTGDNSALITQAIANDSKPL
DQASPDFRFAAAVAEFGMLLRDSPYRGESSFDQVLELAQGSKGADPEGYRSEFIQLVKTAQALKF

Sequences:

>Translated_545_residues
MATSSSRKPLSQRSLTLLLSGCLLGGQILAGCQMASQRTSDTGMDAMAPQVAETESMPVMPTPDGEIPQEVPDLSQEDYN
LIRDNPFQLVRTEPLSTFALDVDSGAYSNVRRFLDDGQLPPADAVRLEEMINYFTYDYPAPDNQPFAINTELSQAPWQPQ
HQLLRIGIKGQEIENEALPPSNLVFLFDVSGSMNDPDKLPLLKSAFRLLVNELRPEDRVSIVVYAGAAGLVLPSTSGAEK
ETILAALDNLEAGGSTAGGEGIELAYQEAADNFLDNGNNRIILATDGDFNVGMSSDAELIRLIEQKREQDIFLTVLGFGT
GNLKDAKMEQLANNGNGNYAYIDNILEAKKVLVTEMGGTLLTLAKDVKIQVEFNPTQVQAYRLLGYENRLLTAQDFNDDT
KDAGELGAGHTVTALYEIVPVGVDSPVELPTVDDLKYQETQSNSGNFAGELLQLKLRYKPPTGDNSALITQAIANDSKPL
DQASPDFRFAAAVAEFGMLLRDSPYRGESSFDQVLELAQGSKGADPEGYRSEFIQLVKTAQALKF
>Mature_544_residues
ATSSSRKPLSQRSLTLLLSGCLLGGQILAGCQMASQRTSDTGMDAMAPQVAETESMPVMPTPDGEIPQEVPDLSQEDYNL
IRDNPFQLVRTEPLSTFALDVDSGAYSNVRRFLDDGQLPPADAVRLEEMINYFTYDYPAPDNQPFAINTELSQAPWQPQH
QLLRIGIKGQEIENEALPPSNLVFLFDVSGSMNDPDKLPLLKSAFRLLVNELRPEDRVSIVVYAGAAGLVLPSTSGAEKE
TILAALDNLEAGGSTAGGEGIELAYQEAADNFLDNGNNRIILATDGDFNVGMSSDAELIRLIEQKREQDIFLTVLGFGTG
NLKDAKMEQLANNGNGNYAYIDNILEAKKVLVTEMGGTLLTLAKDVKIQVEFNPTQVQAYRLLGYENRLLTAQDFNDDTK
DAGELGAGHTVTALYEIVPVGVDSPVELPTVDDLKYQETQSNSGNFAGELLQLKLRYKPPTGDNSALITQAIANDSKPLD
QASPDFRFAAAVAEFGMLLRDSPYRGESSFDQVLELAQGSKGADPEGYRSEFIQLVKTAQALKF

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=471, Percent_Identity=46.072186836518, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 59262; Mature: 59131

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSSSRKPLSQRSLTLLLSGCLLGGQILAGCQMASQRTSDTGMDAMAPQVAETESMPVM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCCC
PTPDGEIPQEVPDLSQEDYNLIRDNPFQLVRTEPLSTFALDVDSGAYSNVRRFLDDGQLP
CCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
PADAVRLEEMINYFTYDYPAPDNQPFAINTELSQAPWQPQHQLLRIGIKGQEIENEALPP
CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEECCCCCCCCCCCCCC
SNLVFLFDVSGSMNDPDKLPLLKSAFRLLVNELRPEDRVSIVVYAGAAGLVLPSTSGAEK
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCH
ETILAALDNLEAGGSTAGGEGIELAYQEAADNFLDNGNNRIILATDGDFNVGMSSDAELI
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
RLIEQKREQDIFLTVLGFGTGNLKDAKMEQLANNGNGNYAYIDNILEAKKVLVTEMGGTL
HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCEE
LTLAKDVKIQVEFNPTQVQAYRLLGYENRLLTAQDFNDDTKDAGELGAGHTVTALYEIVP
EEEEECEEEEEEECCHHEEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCHHHEEHHHEE
VGVDSPVELPTVDDLKYQETQSNSGNFAGELLQLKLRYKPPTGDNSALITQAIANDSKPL
CCCCCCCCCCCCCCCCCHHCCCCCCCHHEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCC
DQASPDFRFAAAVAEFGMLLRDSPYRGESSFDQVLELAQGSKGADPEGYRSEFIQLVKTA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QALKF
HHHCC
>Mature Secondary Structure 
ATSSSRKPLSQRSLTLLLSGCLLGGQILAGCQMASQRTSDTGMDAMAPQVAETESMPVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCCC
PTPDGEIPQEVPDLSQEDYNLIRDNPFQLVRTEPLSTFALDVDSGAYSNVRRFLDDGQLP
CCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCC
PADAVRLEEMINYFTYDYPAPDNQPFAINTELSQAPWQPQHQLLRIGIKGQEIENEALPP
CHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEECCCCCCCCCCCCCC
SNLVFLFDVSGSMNDPDKLPLLKSAFRLLVNELRPEDRVSIVVYAGAAGLVLPSTSGAEK
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCH
ETILAALDNLEAGGSTAGGEGIELAYQEAADNFLDNGNNRIILATDGDFNVGMSSDAELI
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
RLIEQKREQDIFLTVLGFGTGNLKDAKMEQLANNGNGNYAYIDNILEAKKVLVTEMGGTL
HHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCEE
LTLAKDVKIQVEFNPTQVQAYRLLGYENRLLTAQDFNDDTKDAGELGAGHTVTALYEIVP
EEEEECEEEEEEECCHHEEEEEEECCCCCEEEECCCCCCCCHHHHCCCCCHHHEEHHHEE
VGVDSPVELPTVDDLKYQETQSNSGNFAGELLQLKLRYKPPTGDNSALITQAIANDSKPL
CCCCCCCCCCCCCCCCCHHCCCCCCCHHEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCC
DQASPDFRFAAAVAEFGMLLRDSPYRGESSFDQVLELAQGSKGADPEGYRSEFIQLVKTA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QALKF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]