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The map label for this gene is ftsY [H]

Identifier: 170079379

GI number: 170079379

Start: 2915708

End: 2917339

Strand: Reverse

Name: ftsY [H]

Synonym: SYNPCC7002_A2793

Alternate gene names: 170079379

Gene position: 2917339-2915708 (Counterclockwise)

Preceding gene: 170079382

Following gene: 170079377

Centisome position: 96.98

GC content: 53.0

Gene sequence:

>1632_bases
GTGGCTATCTTTGATTGGTTTCGGCGCAAGACAACTGACAAATCCCAAGACACCTCTGAACCAACCGTTACAGAAGAACA
GGTGCCAGAATCCCCCACGGAGGAAGCTGCTGCCCCCGAACCTGAGACGCCATCAACCCCAGAAATTGACTATCTAAACT
GGGCGAAATCCGCTTACAAAAATATCCAAGAAAAAAAGGGTATTGAAACAACGGAAGTACCTCAAACTGAGACCGCAGAA
CCCCAGGAGCCAGAACCAGAAGTTATTGCCGCCGAGACTGAACCAGAAACACCAGCCCCCGAACCCACGGCAACGGCCCT
AGAAACTGCGCTAGAAACGGCTCCCGAAACCACCGAAGAGATCGCTCCTCAACCAGAAGCCCCAGCAGAAGCAACTCCTC
CAGAACCAGAGAGTGAACCAGCCAAGATTGAAGCAACCGAAACCGTTACACCTGTTGCTCCAGAGCCAGCACCAGAAGTT
ATTGCGGCCGAAGCAGAGAGTGCCCCAGATAGCGAGACAGTAGCCACACCAGAACCGGAAACCACCCCAGCGACACCCGC
TTGGATGAAAAAGTCCGACGGCCTCGAAAAGCTCAAAGAAACGGCGATCGATACCGAAGGGCTAGAGTTTGACGAAAATT
TCCTCTGGTCTGCCAAGGTACTTGCGGATCAAGGCCGTGATGCCAGTGATATTTCCCTCGAAGAAATTGAATGGCTCAAA
AAGCTCCGGGATGGTCTCGGTAAAACCCGTCGCAGCTTGGTCAATCAACTCAAGGCTGTAGTGGGTCAAGGGCCGCTCAA
TGATGAAGCCGTACTAGAAATTGAATCACTTCTGCTCCAGGCTGACGTGGGCATTGAGGCCACTGATTACATCATCGAAA
CCCTCCAGGAACGACTCCGCCAGGAAGCACTGCCCCCCGAAGCGGCGATCGCCTATCTCAAAGAAATCCTCCGGGACATC
CTCGATAAACCCTTGGCGAAACTACCCAGCACCGAATTTGCTCCCGAAGCCGACAAGCTTAATGTCTGGATGCTCACTGG
CGTCAACGGTGCCGGGAAAACCACCACCATCGGTAAACTGGCCCACCTTGCCAACCAATCGGGTTATCGCTGTGTCATTG
CTGCTGCCGATACCTTCCGGGCCGCTGCTGTCGAACAGGTAAAAGTCTGGGGCGAAAGAACTGACACTCCTGTAATCGCC
AACCCCGGTAAAAATACTGATCCCGCAGCGGTGGTTTTTGATGGTATTACCGCCGCCCAAGCGCGGCAGGCGCAAATTTT
GCTGGTGGATACGGCTGGCCGCTTACAAAATAAGAAAAACTTGATGGATGAACTTGCGAAAATCCGGCGGATTGTCGATA
AAAAAGCTCCCGATGCCCAGGTGGAATCCCTCTTAGTCCTAGATGCAACCCTCGGCCAAAATGGTCTACGGCAAGCCCAA
GTTTTCTCAGAAGCGGCAAAACTCAGTGGCGTTGTCCTGACAAAACTAGATGGTACGGCCCGGGGTGGGGTAGCACTCGC
CGTAAGTCAGCAACTCGGTTTACCAATTCGCTTTATCGGCGCTGGGGAAGGGATTGAAGATCTCCGGCCCTTCTCTAGTT
ATGAATTTGTTGAAGCGCTGCTGGATGGTTAG

Upstream 100 bases:

>100_bases
CCCCGTCACAAATGCCTAAACGGTCGGGAAACCCTCCGTTTACAAACCCCGATCAAGCCATAATAATGAAAACAGTTCAT
TTACTCTCCTAGGAATTTCT

Downstream 100 bases:

>100_bases
ACTCCAGTAAAATCAAAAATCTTGAGAGGCGGCTATTTGCATTAAGCAACCGCCCTTTTTTGTGGCTTGTAGAATCCTTA
GCTTTTGTCACAAAGGATTT

Product: signal recognition particle-docking protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MAIFDWFRRKTTDKSQDTSEPTVTEEQVPESPTEEAAAPEPETPSTPEIDYLNWAKSAYKNIQEKKGIETTEVPQTETAE
PQEPEPEVIAAETEPETPAPEPTATALETALETAPETTEEIAPQPEAPAEATPPEPESEPAKIEATETVTPVAPEPAPEV
IAAEAESAPDSETVATPEPETTPATPAWMKKSDGLEKLKETAIDTEGLEFDENFLWSAKVLADQGRDASDISLEEIEWLK
KLRDGLGKTRRSLVNQLKAVVGQGPLNDEAVLEIESLLLQADVGIEATDYIIETLQERLRQEALPPEAAIAYLKEILRDI
LDKPLAKLPSTEFAPEADKLNVWMLTGVNGAGKTTTIGKLAHLANQSGYRCVIAAADTFRAAAVEQVKVWGERTDTPVIA
NPGKNTDPAAVVFDGITAAQARQAQILLVDTAGRLQNKKNLMDELAKIRRIVDKKAPDAQVESLLVLDATLGQNGLRQAQ
VFSEAAKLSGVVLTKLDGTARGGVALAVSQQLGLPIRFIGAGEGIEDLRPFSSYEFVEALLDG

Sequences:

>Translated_543_residues
MAIFDWFRRKTTDKSQDTSEPTVTEEQVPESPTEEAAAPEPETPSTPEIDYLNWAKSAYKNIQEKKGIETTEVPQTETAE
PQEPEPEVIAAETEPETPAPEPTATALETALETAPETTEEIAPQPEAPAEATPPEPESEPAKIEATETVTPVAPEPAPEV
IAAEAESAPDSETVATPEPETTPATPAWMKKSDGLEKLKETAIDTEGLEFDENFLWSAKVLADQGRDASDISLEEIEWLK
KLRDGLGKTRRSLVNQLKAVVGQGPLNDEAVLEIESLLLQADVGIEATDYIIETLQERLRQEALPPEAAIAYLKEILRDI
LDKPLAKLPSTEFAPEADKLNVWMLTGVNGAGKTTTIGKLAHLANQSGYRCVIAAADTFRAAAVEQVKVWGERTDTPVIA
NPGKNTDPAAVVFDGITAAQARQAQILLVDTAGRLQNKKNLMDELAKIRRIVDKKAPDAQVESLLVLDATLGQNGLRQAQ
VFSEAAKLSGVVLTKLDGTARGGVALAVSQQLGLPIRFIGAGEGIEDLRPFSSYEFVEALLDG
>Mature_542_residues
AIFDWFRRKTTDKSQDTSEPTVTEEQVPESPTEEAAAPEPETPSTPEIDYLNWAKSAYKNIQEKKGIETTEVPQTETAEP
QEPEPEVIAAETEPETPAPEPTATALETALETAPETTEEIAPQPEAPAEATPPEPESEPAKIEATETVTPVAPEPAPEVI
AAEAESAPDSETVATPEPETTPATPAWMKKSDGLEKLKETAIDTEGLEFDENFLWSAKVLADQGRDASDISLEEIEWLKK
LRDGLGKTRRSLVNQLKAVVGQGPLNDEAVLEIESLLLQADVGIEATDYIIETLQERLRQEALPPEAAIAYLKEILRDIL
DKPLAKLPSTEFAPEADKLNVWMLTGVNGAGKTTTIGKLAHLANQSGYRCVIAAADTFRAAAVEQVKVWGERTDTPVIAN
PGKNTDPAAVVFDGITAAQARQAQILLVDTAGRLQNKKNLMDELAKIRRIVDKKAPDAQVESLLVLDATLGQNGLRQAQV
FSEAAKLSGVVLTKLDGTARGGVALAVSQQLGLPIRFIGAGEGIEDLRPFSSYEFVEALLDG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=300, Percent_Identity=32, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI226371618, Length=231, Percent_Identity=33.7662337662338, Blast_Score=129, Evalue=1e-29,
Organism=Homo sapiens, GI295424842, Length=278, Percent_Identity=30.5755395683453, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI23308697, Length=278, Percent_Identity=30.5755395683453, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.8148148148148, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI1789874, Length=308, Percent_Identity=46.7532467532467, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI1788963, Length=295, Percent_Identity=31.5254237288136, Blast_Score=128, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=327, Percent_Identity=30.5810397553517, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=245, Percent_Identity=31.8367346938775, Blast_Score=108, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=275, Percent_Identity=33.0909090909091, Blast_Score=152, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6320498, Length=321, Percent_Identity=27.4143302180685, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=34.5070422535211, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641198, Length=250, Percent_Identity=28.4, Blast_Score=97, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 58556; Mature: 58425

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFDWFRRKTTDKSQDTSEPTVTEEQVPESPTEEAAAPEPETPSTPEIDYLNWAKSAYK
CCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHH
NIQEKKGIETTEVPQTETAEPQEPEPEVIAAETEPETPAPEPTATALETALETAPETTEE
HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHH
IAPQPEAPAEATPPEPESEPAKIEATETVTPVAPEPAPEVIAAEAESAPDSETVATPEPE
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
TTPATPAWMKKSDGLEKLKETAIDTEGLEFDENFLWSAKVLADQGRDASDISLEEIEWLK
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
KLRDGLGKTRRSLVNQLKAVVGQGPLNDEAVLEIESLLLQADVGIEATDYIIETLQERLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QEALPPEAAIAYLKEILRDILDKPLAKLPSTEFAPEADKLNVWMLTGVNGAGKTTTIGKL
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
AHLANQSGYRCVIAAADTFRAAAVEQVKVWGERTDTPVIANPGKNTDPAAVVFDGITAAQ
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHC
ARQAQILLVDTAGRLQNKKNLMDELAKIRRIVDKKAPDAQVESLLVLDATLGQNGLRQAQ
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEHHHCCCHHHHHH
VFSEAAKLSGVVLTKLDGTARGGVALAVSQQLGLPIRFIGAGEGIEDLRPFSSYEFVEAL
HHHHHHHHCCEEEEECCCCCCCCEEEEEHHHCCCCEEEEECCCCHHHCCCCCHHHHHHHH
LDG
HCC
>Mature Secondary Structure 
AIFDWFRRKTTDKSQDTSEPTVTEEQVPESPTEEAAAPEPETPSTPEIDYLNWAKSAYK
CHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHH
NIQEKKGIETTEVPQTETAEPQEPEPEVIAAETEPETPAPEPTATALETALETAPETTEE
HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHH
IAPQPEAPAEATPPEPESEPAKIEATETVTPVAPEPAPEVIAAEAESAPDSETVATPEPE
HCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
TTPATPAWMKKSDGLEKLKETAIDTEGLEFDENFLWSAKVLADQGRDASDISLEEIEWLK
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
KLRDGLGKTRRSLVNQLKAVVGQGPLNDEAVLEIESLLLQADVGIEATDYIIETLQERLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QEALPPEAAIAYLKEILRDILDKPLAKLPSTEFAPEADKLNVWMLTGVNGAGKTTTIGKL
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
AHLANQSGYRCVIAAADTFRAAAVEQVKVWGERTDTPVIANPGKNTDPAAVVFDGITAAQ
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHC
ARQAQILLVDTAGRLQNKKNLMDELAKIRRIVDKKAPDAQVESLLVLDATLGQNGLRQAQ
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEHHHCCCHHHHHH
VFSEAAKLSGVVLTKLDGTARGGVALAVSQQLGLPIRFIGAGEGIEDLRPFSSYEFVEAL
HHHHHHHHCCEEEEECCCCCCCCEEEEEHHHCCCCEEEEECCCCHHHCCCCCHHHHHHHH
LDG
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]