Click here to switch to the map view.

The map label for this gene is 170079377

Identifier: 170079377

GI number: 170079377

Start: 2914281

End: 2915198

Strand: Reverse

Name: 170079377

Synonym: SYNPCC7002_A2791

Alternate gene names: NA

Gene position: 2915198-2914281 (Counterclockwise)

Preceding gene: 170079379

Following gene: 170079375

Centisome position: 96.91

GC content: 50.76

Gene sequence:

>918_bases
ATGATTCATCTGATTTATTCTGATCAATTTCTTGACCATGGCACGGGGCGTTCCCACCCAGAAAGCGCACGACGGTTAAC
GGCGATCGCCCAAGCCCTGAAAGCCGTCTCCTGGGCGAACCAAATTCAGTGGCACGAACCAACAGCGATCGCCTTTCGAG
ATCCTTTGCCCTGGGTGCGCCAATTGCATGACGACTACTATTTGAAAGAACTGCAAAAATTGGCAGAATCTGGCGGTGGC
TATTGGGATCCGGATACTCCTGTTTCACCCCAAAGTTTTGACGTGGCACTTTTGGCGGTCAATGCTTGTTTAGATGGGGT
GGATTTAGCGCTTCAAACCAAGGAGCCTGTATTTGCCTTGGTGCGGCCCCCCGGTCATCACGCCACCCGCAGCACAGGGA
TGGGATTTTGCCTGTTGGGAAATGTGGCGATCGCCGCCCATTATGCCTTGGGTTTAGCGGGCATTAAAAAAGTGGCGATC
CTCGATTGGGATGTCCACCACGGCAACGGCACAGAATATTTAGTCGAGGAAAATCCCCAGATTATTTATTGTTCTCTCCA
TCAGGATCCGGCTTATCCGGGCACTGGCCAGGCTCACCATCATGGTCGCCACCAAAATATTTTAAATATTCCCCTCAAGC
CAGGTGCAGATCGAAGGATCTATGTCCAAAAATTCCAGGACGTGGTTTTACCATACTTGCAAGAGTTTCAACCGGATCTG
TTAATTGTCAGTGCGGGCTACGATGCCACCGCCAAAGATCCCTTAGCGGGAATGAATCTCCAGCCCCAGGATTACAAAGT
TTTTAGCGAATTTTGCCAGCAGTTACCTTGTCCAATCCTGTTTGCCCTAGAAGGGGGCTATCATCTCCAAACCTTGGCAG
AATCGGTGGTGGCCACCCTCGAACCCTTTGCTCAGTAA

Upstream 100 bases:

>100_bases
CAAAAAATAAATGCCCAAGAGGACAAGACCAAGGCCGATCAATTTACCGAGAAATTTCATTGTTTTTTGTTCCTAGCAAT
GCTTTAGTGTAGCGAATACC

Downstream 100 bases:

>100_bases
GGACAATGAATTTCTCCCAGCAGAACCGGACATGGCGCCCCCGTCACCTTCGGCAGATTTCCCGGAAATTCTTTGATGCG
CCAGTAGGCTAATACCGCAA

Product: acetylpolyamine aminohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAIAFRDPLPWVRQLHDDYYLKELQKLAESGGG
YWDPDTPVSPQSFDVALLAVNACLDGVDLALQTKEPVFALVRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAI
LDWDVHHGNGTEYLVEENPQIIYCSLHQDPAYPGTGQAHHHGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDL
LIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATLEPFAQ

Sequences:

>Translated_305_residues
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAIAFRDPLPWVRQLHDDYYLKELQKLAESGGG
YWDPDTPVSPQSFDVALLAVNACLDGVDLALQTKEPVFALVRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAI
LDWDVHHGNGTEYLVEENPQIIYCSLHQDPAYPGTGQAHHHGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDL
LIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATLEPFAQ
>Mature_305_residues
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAIAFRDPLPWVRQLHDDYYLKELQKLAESGGG
YWDPDTPVSPQSFDVALLAVNACLDGVDLALQTKEPVFALVRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAI
LDWDVHHGNGTEYLVEENPQIIYCSLHQDPAYPGTGQAHHHGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDL
LIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATLEPFAQ

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Homo sapiens, GI20070354, Length=223, Percent_Identity=39.0134529147982, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI13128864, Length=324, Percent_Identity=30.8641975308642, Blast_Score=138, Evalue=5e-33,
Organism=Homo sapiens, GI153085395, Length=339, Percent_Identity=31.858407079646, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI30795202, Length=213, Percent_Identity=38.0281690140845, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI30795204, Length=213, Percent_Identity=38.0281690140845, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI17158039, Length=213, Percent_Identity=38.0281690140845, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI148539870, Length=341, Percent_Identity=31.9648093841642, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI169234807, Length=341, Percent_Identity=31.9648093841642, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI62750349, Length=340, Percent_Identity=29.7058823529412, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI62750347, Length=340, Percent_Identity=29.7058823529412, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI226529806, Length=223, Percent_Identity=34.9775784753363, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI13128860, Length=295, Percent_Identity=24.0677966101695, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI8923769, Length=292, Percent_Identity=23.972602739726, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI13128862, Length=216, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI209862883, Length=181, Percent_Identity=27.6243093922652, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI217272877, Length=181, Percent_Identity=27.6243093922652, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI293336691, Length=259, Percent_Identity=23.1660231660232, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI262073088, Length=179, Percent_Identity=26.8156424581006, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17540334, Length=229, Percent_Identity=34.9344978165939, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI193206283, Length=229, Percent_Identity=34.9344978165939, Blast_Score=137, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17540332, Length=229, Percent_Identity=34.9344978165939, Blast_Score=137, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17537347, Length=218, Percent_Identity=37.6146788990826, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193209491, Length=314, Percent_Identity=31.5286624203822, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI25154020, Length=213, Percent_Identity=36.150234741784, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25154022, Length=210, Percent_Identity=35.2380952380952, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17508561, Length=303, Percent_Identity=24.0924092409241, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561978, Length=173, Percent_Identity=26.5895953757225, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17534739, Length=215, Percent_Identity=24.1860465116279, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324307, Length=215, Percent_Identity=35.3488372093023, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6321244, Length=288, Percent_Identity=23.9583333333333, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323999, Length=248, Percent_Identity=24.1935483870968, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325325, Length=164, Percent_Identity=29.2682926829268, Blast_Score=76, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6325141, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24642146, Length=239, Percent_Identity=37.2384937238494, Blast_Score=147, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24642144, Length=239, Percent_Identity=37.2384937238494, Blast_Score=147, Evalue=7e-36,
Organism=Drosophila melanogaster, GI24642142, Length=239, Percent_Identity=37.2384937238494, Blast_Score=147, Evalue=7e-36,
Organism=Drosophila melanogaster, GI281360899, Length=312, Percent_Identity=33.6538461538462, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI24641720, Length=237, Percent_Identity=34.5991561181435, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI281360801, Length=237, Percent_Identity=34.5991561181435, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI281360799, Length=237, Percent_Identity=34.5991561181435, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI24644244, Length=301, Percent_Identity=24.5847176079734, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24657891, Length=172, Percent_Identity=28.4883720930233, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 33813; Mature: 33813

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAIAFRDPLPWVR
CEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
QLHDDYYLKELQKLAESGGGYWDPDTPVSPQSFDVALLAVNACLDGVDLALQTKEPVFAL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEHHHHHCCCCEEEECCCCEEEE
VRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAILDWDVHHGNGTEYLVEENPQ
ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCC
IIYCSLHQDPAYPGTGQAHHHGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDL
EEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
LIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATL
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
EPFAQ
HHHCC
>Mature Secondary Structure
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAIAFRDPLPWVR
CEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
QLHDDYYLKELQKLAESGGGYWDPDTPVSPQSFDVALLAVNACLDGVDLALQTKEPVFAL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEHHHHHCCCCEEEECCCCEEEE
VRPPGHHATRSTGMGFCLLGNVAIAAHYALGLAGIKKVAILDWDVHHGNGTEYLVEENPQ
ECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEEEECCCC
IIYCSLHQDPAYPGTGQAHHHGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDL
EEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
LIVSAGYDATAKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATL
EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
EPFAQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]