| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079316
Identifier: 170079316
GI number: 170079316
Start: 2850725
End: 2851501
Strand: Reverse
Name: 170079316
Synonym: SYNPCC7002_A2724
Alternate gene names: NA
Gene position: 2851501-2850725 (Counterclockwise)
Preceding gene: 170079317
Following gene: 170079315
Centisome position: 94.8
GC content: 53.41
Gene sequence:
>777_bases ATGGTAGTTGAGCAAATCCTGGATCTCGCCAAACAGAAGGGTATCGAAGCGGAGGTGTACTACCGCAGTAGCCGTGATAC TCCCATCGACTTTGAGAATAATCGCCTCAAGTCCCTCGAAACTAAAGCGAGCCAGGGGGTCGCCCTGCGGGTGGTCGTCG ATGGAAAATTGGGCTTTGCCAGTGCCACGGATTTAACGCGCCTCGAAGATGTCGTCGATGCGGCGATCGCCACGGCAGAA ATCGGTGATCCGGTGGATTTTGAGTTTGCCAAGGATTTTCAAGGGGTTGTCCCCGAAAGCGATTATGTGCTGCCAGAAAC CGCGAAACTGGTAAAAATTGGCGAAACCCTCATCGAAAAAGTACGGGCTTACAACGACGATATTCTCGTCAGTGCGGGAT TTCATATCCGCTCTGGTCAGACCAAACTGGCCACTACCAGCGGCGTCTATGGCGAACGCAACAGCAAAATTGTTAGTGCC AGCCTGGGCGGAAATCTTGTCCAGGGGGAAGATTTTCTCAATGCCTACGGTTACGATGTCGCCAAGGATGGGGAACCGGA TTACGACAAAATCCTCGCCACCCTCATCGAAAAATATACCAACGCCGAAAAAGCAGCCCAAATCACCAGCGGTCAATACC CGGTGCTGTTTACCCCCAGGGCGGCCCTCAGCGCCATTGGCGGCCTGTTTGATACGATTCTCTCCGGTCAAGTGGTGGTG CAAAAAGCCTCGCCCCTCGCCGGAAAAATGGCGAACAACTCTTTGGCGATCGCCTAA
Upstream 100 bases:
>100_bases TTAGGCAATTTTCAACCAAAGGCGATCGCCCCCGGTGATCCAAAAGAATCTTCTACAATGGGGAGCGGCCGTTATTCTCA AATTGTGTTTAGAAAGTTTT
Downstream 100 bases:
>100_bases GCATTTACGAAGATCCGACCATCGGTGTTTCCGCCTGTCCCTTTGATGACGAAGGTACCCCCACCCAGAAAAAAACCTTT ATCGAAAATGGTATTGTCCA
Product: modulator of DNA gyrase
Products: NA
Alternate protein names: Modulator Of DNA Gyrase; PmbA Protein; TldD/PmbA Family; Modulator Of DNA Gyrase PmbA-Like Protein; PmbA/TldD Family Protein; DNA Gyrase Modulator Peptidase U; Tetrahydromethanopterin S-Methyltransferase; Zn-Dependent Protease-Like Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MVVEQILDLAKQKGIEAEVYYRSSRDTPIDFENNRLKSLETKASQGVALRVVVDGKLGFASATDLTRLEDVVDAAIATAE IGDPVDFEFAKDFQGVVPESDYVLPETAKLVKIGETLIEKVRAYNDDILVSAGFHIRSGQTKLATTSGVYGERNSKIVSA SLGGNLVQGEDFLNAYGYDVAKDGEPDYDKILATLIEKYTNAEKAAQITSGQYPVLFTPRAALSAIGGLFDTILSGQVVV QKASPLAGKMANNSLAIA
Sequences:
>Translated_258_residues MVVEQILDLAKQKGIEAEVYYRSSRDTPIDFENNRLKSLETKASQGVALRVVVDGKLGFASATDLTRLEDVVDAAIATAE IGDPVDFEFAKDFQGVVPESDYVLPETAKLVKIGETLIEKVRAYNDDILVSAGFHIRSGQTKLATTSGVYGERNSKIVSA SLGGNLVQGEDFLNAYGYDVAKDGEPDYDKILATLIEKYTNAEKAAQITSGQYPVLFTPRAALSAIGGLFDTILSGQVVV QKASPLAGKMANNSLAIA >Mature_258_residues MVVEQILDLAKQKGIEAEVYYRSSRDTPIDFENNRLKSLETKASQGVALRVVVDGKLGFASATDLTRLEDVVDAAIATAE IGDPVDFEFAKDFQGVVPESDYVLPETAKLVKIGETLIEKVRAYNDDILVSAGFHIRSGQTKLATTSGVYGERNSKIVSA SLGGNLVQGEDFLNAYGYDVAKDGEPDYDKILATLIEKYTNAEKAAQITSGQYPVLFTPRAALSAIGGLFDTILSGQVVV QKASPLAGKMANNSLAIA
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27659; Mature: 27659
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVEQILDLAKQKGIEAEVYYRSSRDTPIDFENNRLKSLETKASQGVALRVVVDGKLGFA CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC SATDLTRLEDVVDAAIATAEIGDPVDFEFAKDFQGVVPESDYVLPETAKLVKIGETLIEK CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHH VRAYNDDILVSAGFHIRSGQTKLATTSGVYGERNSKIVSASLGGNLVQGEDFLNAYGYDV HHHCCCCEEEECCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCEECCHHHHHHCCCCC AKDGEPDYDKILATLIEKYTNAEKAAQITSGQYPVLFTPRAALSAIGGLFDTILSGQVVV CCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCEEEE QKASPLAGKMANNSLAIA EECCCCHHHHCCCCEECC >Mature Secondary Structure MVVEQILDLAKQKGIEAEVYYRSSRDTPIDFENNRLKSLETKASQGVALRVVVDGKLGFA CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC SATDLTRLEDVVDAAIATAEIGDPVDFEFAKDFQGVVPESDYVLPETAKLVKIGETLIEK CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHH VRAYNDDILVSAGFHIRSGQTKLATTSGVYGERNSKIVSASLGGNLVQGEDFLNAYGYDV HHHCCCCEEEECCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCEECCHHHHHHCCCCC AKDGEPDYDKILATLIEKYTNAEKAAQITSGQYPVLFTPRAALSAIGGLFDTILSGQVVV CCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCEEEE QKASPLAGKMANNSLAIA EECCCCHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA