Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079308

Identifier: 170079308

GI number: 170079308

Start: 2843439

End: 2844593

Strand: Reverse

Name: 170079308

Synonym: SYNPCC7002_A2715

Alternate gene names: NA

Gene position: 2844593-2843439 (Counterclockwise)

Preceding gene: 170079310

Following gene: 170079307

Centisome position: 94.57

GC content: 40.43

Gene sequence:

>1155_bases
GTGAAAACCTGCATCTACTGTAAGACCGATAAAAATGATGATGAGTTTACATTAGAACATGTGATCTCACAGTTTTTAGG
TGGCGCGCAGGCACCTGACTACCTGAAAACAAGAAATGTATGTGCTACGTGTAATAGTAATCTGGGGTTGTTTGTAGATG
CATCCTTTGAAAAAGACTTTTTGGTTTTTAATACATTAAACGAAGCGGCATATTCCTTTTTCGATCCTGATAGTCCAACT
CCACTTCCTTTAAAAAATATGGGGATATCTGATCTTATCCCTCCAAATATGAAAGAAGAAGAAATATGTGAGTGCTGGAT
TGGGCCTTTAGGTGAACAAATATATTGGATTCGTCCTTCGGACGAACGGATGTATTGGTACTCCGGGGGCAACCCAAGAA
CAGTAAAAAAAGTAAGGACCAGAGCCTACTTTATATGGTCAGAGCGATCTCAAAAGAATCCAATAATTACTTGGCTATCT
TTCGAAGATGCGTTTAATGGTAGAAAAGTTAGAAAGGTGTCATGCACTGAAGTTGCAGGGGCTAGTTTAGCGGACATTGG
CTTTTCTGAGCCGGACGAGTTGGATTTAAAACGGATTGCGTATTTCAACAAAAAGTGCAGTAACGGTCAGGAGCGAAAAA
ACCGATTGTCAATGTACCTTCGTTATGATGTTCGGTTTATGGCTAAGCTGGCAATTGGTCTTGGTCATGTCTTATTTGGA
GAGAAATTCGATAATTCAAACTATACCAAAGAGCTACATAAAGCTCTTTGGTATAAAGAGGGCGATCCAGAGCCAGGCAT
AGTGGGTCGGAACAACCTGGGTCAGGACAATGAATTCCTAAAAAAAGAGTGCGGGTTCACGCATGGGGTAACGCTAACAA
TCTTGCCTTCTTCAAAATATGTCGTTCTTAATCTTAATATTTCAAGAAAAATGAATTGGGTTATAGGGATTGCTGAAATC
GAAGATGTCAAAGAATGTATTGGGGAGGATTTGAAGCATGGGTTGTGCGTGCTGTTATTTAAGCCCCTTGGCAAAGGTAT
CAGTCTGCCGTTACCTGAGCTAATTGCTCACAACTCAAATAATATACTTCACCCAAAGCTCGTCGAAGTCAAAAATCTTG
CCGGTAAGGGGATCTGTTACTTTGAAAACCTATGA

Upstream 100 bases:

>100_bases
ATTCTGGTAGATTTGGGTTGTTATGCTGCAGGTGCGGTATGACTCCTAGTTAGGTTCAAGAATGCTCGTTGGAGTTTATT
GAGATAAAGGAATTTTCGAA

Downstream 100 bases:

>100_bases
AGAACCTAACAATTACATGCACTTGAACCGCAAAATGCGCTACTCGTTCCTCGCTCTACTTTTTATGGCCGGTGATGTGA
AGCGTTATGGTGCTGACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT
PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS
FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG
EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI
EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL

Sequences:

>Translated_384_residues
MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT
PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS
FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG
EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI
EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL
>Mature_384_residues
MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT
PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS
FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG
EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI
EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43655; Mature: 43655

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDF
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEECCCCCCE
LVFNTLNEAAYSFFDPDSPTPLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPS
EEEECHHHHHHHHCCCCCCCCCCHHCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECC
DERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLSFEDAFNGRKVRKVSCTEVAG
CCEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCC
ASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG
CCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC
EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKY
CCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCE
VVLNLNISRKMNWVIGIAEIEDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSN
EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCC
NILHPKLVEVKNLAGKGICYFENL
CCCCCHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDF
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEECCCCCCE
LVFNTLNEAAYSFFDPDSPTPLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPS
EEEECHHHHHHHHCCCCCCCCCCHHCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECC
DERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLSFEDAFNGRKVRKVSCTEVAG
CCEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCC
ASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG
CCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC
EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKY
CCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCE
VVLNLNISRKMNWVIGIAEIEDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSN
EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCC
NILHPKLVEVKNLAGKGICYFENL
CCCCCHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA