| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079308
Identifier: 170079308
GI number: 170079308
Start: 2843439
End: 2844593
Strand: Reverse
Name: 170079308
Synonym: SYNPCC7002_A2715
Alternate gene names: NA
Gene position: 2844593-2843439 (Counterclockwise)
Preceding gene: 170079310
Following gene: 170079307
Centisome position: 94.57
GC content: 40.43
Gene sequence:
>1155_bases GTGAAAACCTGCATCTACTGTAAGACCGATAAAAATGATGATGAGTTTACATTAGAACATGTGATCTCACAGTTTTTAGG TGGCGCGCAGGCACCTGACTACCTGAAAACAAGAAATGTATGTGCTACGTGTAATAGTAATCTGGGGTTGTTTGTAGATG CATCCTTTGAAAAAGACTTTTTGGTTTTTAATACATTAAACGAAGCGGCATATTCCTTTTTCGATCCTGATAGTCCAACT CCACTTCCTTTAAAAAATATGGGGATATCTGATCTTATCCCTCCAAATATGAAAGAAGAAGAAATATGTGAGTGCTGGAT TGGGCCTTTAGGTGAACAAATATATTGGATTCGTCCTTCGGACGAACGGATGTATTGGTACTCCGGGGGCAACCCAAGAA CAGTAAAAAAAGTAAGGACCAGAGCCTACTTTATATGGTCAGAGCGATCTCAAAAGAATCCAATAATTACTTGGCTATCT TTCGAAGATGCGTTTAATGGTAGAAAAGTTAGAAAGGTGTCATGCACTGAAGTTGCAGGGGCTAGTTTAGCGGACATTGG CTTTTCTGAGCCGGACGAGTTGGATTTAAAACGGATTGCGTATTTCAACAAAAAGTGCAGTAACGGTCAGGAGCGAAAAA ACCGATTGTCAATGTACCTTCGTTATGATGTTCGGTTTATGGCTAAGCTGGCAATTGGTCTTGGTCATGTCTTATTTGGA GAGAAATTCGATAATTCAAACTATACCAAAGAGCTACATAAAGCTCTTTGGTATAAAGAGGGCGATCCAGAGCCAGGCAT AGTGGGTCGGAACAACCTGGGTCAGGACAATGAATTCCTAAAAAAAGAGTGCGGGTTCACGCATGGGGTAACGCTAACAA TCTTGCCTTCTTCAAAATATGTCGTTCTTAATCTTAATATTTCAAGAAAAATGAATTGGGTTATAGGGATTGCTGAAATC GAAGATGTCAAAGAATGTATTGGGGAGGATTTGAAGCATGGGTTGTGCGTGCTGTTATTTAAGCCCCTTGGCAAAGGTAT CAGTCTGCCGTTACCTGAGCTAATTGCTCACAACTCAAATAATATACTTCACCCAAAGCTCGTCGAAGTCAAAAATCTTG CCGGTAAGGGGATCTGTTACTTTGAAAACCTATGA
Upstream 100 bases:
>100_bases ATTCTGGTAGATTTGGGTTGTTATGCTGCAGGTGCGGTATGACTCCTAGTTAGGTTCAAGAATGCTCGTTGGAGTTTATT GAGATAAAGGAATTTTCGAA
Downstream 100 bases:
>100_bases AGAACCTAACAATTACATGCACTTGAACCGCAAAATGCGCTACTCGTTCCTCGCTCTACTTTTTATGGCCGGTGATGTGA AGCGTTATGGTGCTGACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL
Sequences:
>Translated_384_residues MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL >Mature_384_residues MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDFLVFNTLNEAAYSFFDPDSPT PLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPSDERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLS FEDAFNGRKVRKVSCTEVAGASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKYVVLNLNISRKMNWVIGIAEI EDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSNNILHPKLVEVKNLAGKGICYFENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43655; Mature: 43655
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDF CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEECCCCCCE LVFNTLNEAAYSFFDPDSPTPLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPS EEEECHHHHHHHHCCCCCCCCCCHHCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECC DERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLSFEDAFNGRKVRKVSCTEVAG CCEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCC ASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG CCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKY CCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCE VVLNLNISRKMNWVIGIAEIEDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSN EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCC NILHPKLVEVKNLAGKGICYFENL CCCCCHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MKTCIYCKTDKNDDEFTLEHVISQFLGGAQAPDYLKTRNVCATCNSNLGLFVDASFEKDF CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCEEEEECCCCCCE LVFNTLNEAAYSFFDPDSPTPLPLKNMGISDLIPPNMKEEEICECWIGPLGEQIYWIRPS EEEECHHHHHHHHCCCCCCCCCCHHCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECC DERMYWYSGGNPRTVKKVRTRAYFIWSERSQKNPIITWLSFEDAFNGRKVRKVSCTEVAG CCEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCC ASLADIGFSEPDELDLKRIAYFNKKCSNGQERKNRLSMYLRYDVRFMAKLAIGLGHVLFG CCHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC EKFDNSNYTKELHKALWYKEGDPEPGIVGRNNLGQDNEFLKKECGFTHGVTLTILPSSKY CCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCE VVLNLNISRKMNWVIGIAEIEDVKECIGEDLKHGLCVLLFKPLGKGISLPLPELIAHNSN EEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHCCCC NILHPKLVEVKNLAGKGICYFENL CCCCCHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA