Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079269

Identifier: 170079269

GI number: 170079269

Start: 2803417

End: 2804277

Strand: Reverse

Name: 170079269

Synonym: SYNPCC7002_A2676

Alternate gene names: NA

Gene position: 2804277-2803417 (Counterclockwise)

Preceding gene: 170079270

Following gene: 170079268

Centisome position: 93.23

GC content: 51.92

Gene sequence:

>861_bases
TTGTTGAGTTTTGTATCGTCGTTTGCTTGTTCCAAGCTACCGCCTATGGTTGGTACATCTACTTTGCACAACCAGATCAT
TCTCATCGCGGAAATGAATGAGCGTGTGTATAAGCCCATTGCCACGCAGCTCACCCGCGCTGGAGCCGTTGTTTGCGTCT
CTGAGACGAGGCAGGCTTTACTCAAAGAATGCGACCGTCGTCATCCCCAGTTACTGTTACTGGGCACGCTCCCCCATACC
AACAGTCTCGATTTATTTCGGCAATGTCGAGATTTTTGGCAAGATTTACCCGTGGTACTCCTCGCCCACCAACCCCTAGT
CAATGATTACTTTCGTGATTGGGCGCTGAAACAGGGGGTGCGAGCGGTACTCAGCAGCTATGTGCAACATCTCGCCCAGT
TACAGGCCACGGTACAGGATATTTTGTTTCCTCTGTTGGAGCCCGTTGCCGCCACGGCCAAGCGCACCATGCCGCCCACC
CCAATCCCGGTGGTCACAAATCCAGCTAAGGGTACGGATATTTCCCGGGCCAGGGCCATCATTGCTTTGAATCAAATTAG
TGAATTTAGTCAAAAGTATTTTGGGAACCTTGCCATCGGTAATTATTGGCGAAAAGCCCAGCAAACGCTCCAGTCAGAAC
ATCCCCTTTTGGACTTTTGGGTGGTGGATCACTGGGGCAGTTTTGATCCGGAGCAAGGGGCGATCGCCTCTCCCGAACCG
CACCTCAGTCAGGCCGAACTACAGAGCCTCAAAGTATGGGTAGCGACCTTTACCCAAGAGTGCGAACGCATTGTTGTAGA
CTTTGCCCAATTGCTCCGCCAATATGCCCTCAGCGAAGCTGATTGTCGCTTTCTCCTTTAG

Upstream 100 bases:

>100_bases
CAAACAAATTACGGACTTGGACGTTTGAATTGCTTGGTTCCAGTGGTGCCCCCCTAAAAAATTAGATTTAGACATCGACA
ATGTTGTCGCCAATGACAAT

Downstream 100 bases:

>100_bases
ATTTTTTACCCCCCCAATCCCCCGTGAATAAAATCTCAATCCAACCCCTCGATAAAACCGTTCCCGTCCAGGGCCAAGAG
ACCTTACTCGATGTGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLSFVSSFACSKLPPMVGTSTLHNQIILIAEMNERVYKPIATQLTRAGAVVCVSETRQALLKECDRRHPQLLLLGTLPHT
NSLDLFRQCRDFWQDLPVVLLAHQPLVNDYFRDWALKQGVRAVLSSYVQHLAQLQATVQDILFPLLEPVAATAKRTMPPT
PIPVVTNPAKGTDISRARAIIALNQISEFSQKYFGNLAIGNYWRKAQQTLQSEHPLLDFWVVDHWGSFDPEQGAIASPEP
HLSQAELQSLKVWVATFTQECERIVVDFAQLLRQYALSEADCRFLL

Sequences:

>Translated_286_residues
MLSFVSSFACSKLPPMVGTSTLHNQIILIAEMNERVYKPIATQLTRAGAVVCVSETRQALLKECDRRHPQLLLLGTLPHT
NSLDLFRQCRDFWQDLPVVLLAHQPLVNDYFRDWALKQGVRAVLSSYVQHLAQLQATVQDILFPLLEPVAATAKRTMPPT
PIPVVTNPAKGTDISRARAIIALNQISEFSQKYFGNLAIGNYWRKAQQTLQSEHPLLDFWVVDHWGSFDPEQGAIASPEP
HLSQAELQSLKVWVATFTQECERIVVDFAQLLRQYALSEADCRFLL
>Mature_286_residues
MLSFVSSFACSKLPPMVGTSTLHNQIILIAEMNERVYKPIATQLTRAGAVVCVSETRQALLKECDRRHPQLLLLGTLPHT
NSLDLFRQCRDFWQDLPVVLLAHQPLVNDYFRDWALKQGVRAVLSSYVQHLAQLQATVQDILFPLLEPVAATAKRTMPPT
PIPVVTNPAKGTDISRARAIIALNQISEFSQKYFGNLAIGNYWRKAQQTLQSEHPLLDFWVVDHWGSFDPEQGAIASPEP
HLSQAELQSLKVWVATFTQECERIVVDFAQLLRQYALSEADCRFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32274; Mature: 32274

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFVSSFACSKLPPMVGTSTLHNQIILIAEMNERVYKPIATQLTRAGAVVCVSETRQAL
CCHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LKECDRRHPQLLLLGTLPHTNSLDLFRQCRDFWQDLPVVLLAHQPLVNDYFRDWALKQGV
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
RAVLSSYVQHLAQLQATVQDILFPLLEPVAATAKRTMPPTPIPVVTNPAKGTDISRARAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH
IALNQISEFSQKYFGNLAIGNYWRKAQQTLQSEHPLLDFWVVDHWGSFDPEQGAIASPEP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
HLSQAELQSLKVWVATFTQECERIVVDFAQLLRQYALSEADCRFLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSFVSSFACSKLPPMVGTSTLHNQIILIAEMNERVYKPIATQLTRAGAVVCVSETRQAL
CCHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LKECDRRHPQLLLLGTLPHTNSLDLFRQCRDFWQDLPVVLLAHQPLVNDYFRDWALKQGV
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
RAVLSSYVQHLAQLQATVQDILFPLLEPVAATAKRTMPPTPIPVVTNPAKGTDISRARAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH
IALNQISEFSQKYFGNLAIGNYWRKAQQTLQSEHPLLDFWVVDHWGSFDPEQGAIASPEP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
HLSQAELQSLKVWVATFTQECERIVVDFAQLLRQYALSEADCRFLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA