| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079231
Identifier: 170079231
GI number: 170079231
Start: 2770770
End: 2771228
Strand: Reverse
Name: 170079231
Synonym: SYNPCC7002_A2637
Alternate gene names: NA
Gene position: 2771228-2770770 (Counterclockwise)
Preceding gene: 170079232
Following gene: 170079228
Centisome position: 92.13
GC content: 49.67
Gene sequence:
>459_bases ATGTCAGGTTGGCTAGAGCACAGCGTACAGGTAGAAGTTGACGCCCCCATCGATCTCGTTTGGGAACTCTGGTCAGATCT CGAACAAATGCCCCAGTGGATGAAATGGATTGATTCTGTCGCCATCCTCAAGGACGACCCAGATCTGTCCCGCTGGAAAT TGGCCAGTGGTTCCTTTGAATTTACCTGGCTCTCTCGGATCACAAAGGTTGTTAAGCACCAAATTATTCAGTGGGAATCC GTTGATGGCCTGCCGAATCGGGGGGCGATCCGTTTCTATGACCGCCATGGCAAAACGATTGTTCGCCTCAGCATTGCCTA TGATATCCCTGGTATTTTGGGACAGGTTATGGATAATCTCTTCTTAGGCCGGGTCGTGGAATCAACCATTCAAGCCGATC TCCACCGTTTCCGAGACTATGTTAAAAATCTTCAGGAACAATCGCCCACCTCTGTCTAG
Upstream 100 bases:
>100_bases ACTGCCTAAAGACTAGGGGCTATTTCCCCCTCCAGAAGCGGTACCAATTCATTCGGGAATTCTGTTACAGTGAGGGGGAT GTTTGGTTTTATAAAGTTTT
Downstream 100 bases:
>100_bases ATCCCTGGGGTGTGTCATCAATTCAGCCAGATGTAGCTATGGGTTTTGCAAGAAAGTTGTGATTCGATCTGCAACTTGGT GCTGAGCGGCACAGGATTGG
Product: oligoketide cyclase/lipid transport protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSGWLEHSVQVEVDAPIDLVWELWSDLEQMPQWMKWIDSVAILKDDPDLSRWKLASGSFEFTWLSRITKVVKHQIIQWES VDGLPNRGAIRFYDRHGKTIVRLSIAYDIPGILGQVMDNLFLGRVVESTIQADLHRFRDYVKNLQEQSPTSV
Sequences:
>Translated_152_residues MSGWLEHSVQVEVDAPIDLVWELWSDLEQMPQWMKWIDSVAILKDDPDLSRWKLASGSFEFTWLSRITKVVKHQIIQWES VDGLPNRGAIRFYDRHGKTIVRLSIAYDIPGILGQVMDNLFLGRVVESTIQADLHRFRDYVKNLQEQSPTSV >Mature_151_residues SGWLEHSVQVEVDAPIDLVWELWSDLEQMPQWMKWIDSVAILKDDPDLSRWKLASGSFEFTWLSRITKVVKHQIIQWESV DGLPNRGAIRFYDRHGKTIVRLSIAYDIPGILGQVMDNLFLGRVVESTIQADLHRFRDYVKNLQEQSPTSV
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17680; Mature: 17549
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWLEHSVQVEVDAPIDLVWELWSDLEQMPQWMKWIDSVAILKDDPDLSRWKLASGSFE CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCH FTWLSRITKVVKHQIIQWESVDGLPNRGAIRFYDRHGKTIVRLSIAYDIPGILGQVMDNL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH FLGRVVESTIQADLHRFRDYVKNLQEQSPTSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGWLEHSVQVEVDAPIDLVWELWSDLEQMPQWMKWIDSVAILKDDPDLSRWKLASGSFE CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCH FTWLSRITKVVKHQIIQWESVDGLPNRGAIRFYDRHGKTIVRLSIAYDIPGILGQVMDNL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH FLGRVVESTIQADLHRFRDYVKNLQEQSPTSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA