Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079165

Identifier: 170079165

GI number: 170079165

Start: 2679520

End: 2681295

Strand: Direct

Name: 170079165

Synonym: SYNPCC7002_A2571

Alternate gene names: NA

Gene position: 2679520-2681295 (Clockwise)

Preceding gene: 170079164

Following gene: 170079166

Centisome position: 89.08

GC content: 54.28

Gene sequence:

>1776_bases
ATGACTGCACCCCAATCCCCCGCTTTTCCGGCCCACCGTCGCCTCGTGACGGACGATCTCGAAAAACTGCTGACGATTTT
GCCCGATGCGATCCGCGATCGCCTCGCCGACCACCCCAATAAAAACGCCCTGATCGAAGTGGTGATGGATCTCGGTCGCA
TCCCCGAAGCTCGCTTTGAAAATAGCACCGAAGACCTAGGCGATCGCCCCATTAGCCGCGAAGATTTGCAATATTCCGTA
GAGCGGGTGGGGATGTTTAGTGGCGACAACCGGGCGGGCATCGAACGCACCCTGCACCGGATCAGTGCCATGCGTAACCG
CCAGGGGGACATCGTCGGTTTAACCTGTCGCATCGGTCGCGCCGTGTTTGGCACGATTTTAATGATCCAGGAACTCGTTG
AAAGCGGTAAATCGATTCTCCTGTTGGGACGGCCTGGGGTCGGTAAAACTACGGCGCTGCGGGAAATTGCGCGGGTTCTC
GCCGATGACTTTGGCAAACGGGTCGTGATTATCGATACGTCCAATGAAATTGCCGGGGATGGTGATATTCCCCATTCCGC
CATTGGTCGCGCCCGCCGGATGCAGGTGGCTACCCCGGAATTGCAACACAAGGTGATGATCGAGGCGGTGGAAAACCATA
TGCCTGAAGTGATTATCATCGATGAAATTGGCACCGAACTTGAAGCCCAGGCCGCCAGAACCATTGCCGAACGGGGTGTT
CAACTCGTTGGGACCGCCCACGGTAATCGCATCGAAAACCTGATTAAAAACCCCACCCTCTCGGATCTTGTCGGCGGCAT
CCAAGCCGTTACCCTGGGGGATGAAGAGGCCCGCAAAAGGCGATCGCAAAAAACTGTCCTCGAACGAAAAGCGCCCCCAA
CCTTTGATGTGGCTGTAGAAATGCTAGAACGGCAACGCTGGGTGGTTCATAGCGATGTGTCGATCACCATTGATACCCTC
TTGCGAGGTCACCAACCGTTACTGGAAGTCCGCACCGTCGATGATCAAGGCAATGTGAAGATCACCGAGGAAATGGAGCA
TCCCGTCGAGATTCCCAACTGGAACCCCCAAACAAAGATGGCCCCTGAACCCAGCCGTCCACGGGGACTGCGTGCTTCTG
GCAAAATGGCCCCTCTCCCTTTCGGTAGCCAGAAAAAAAAATTAGTTTCCCCGAGAAGCAACGCCCTCGATCCCCTCATT
GATCAATCTTGGATTGCCCGTGATCCACAACAGCAGGAGAAAGTGCGGGTGCCTGGCCCCAACGGTGAAGATTACCCCGT
GTATGTCTATCCCTATGGCGTCGGGCGATCGCAGCTAGAGCAAGTGATCGAAATTTTGCGGCTGCCCATCGAACTCACCA
AAGATCTCGAAGGGGCCGATGCGGTTTTAGCGTTGCGATCGCAGTTGAAAAATCATTCTAAATTGCGTCAAATCGCCCAA
ACTTGCCATGTACCGATCCATGCGGTGAAGTCTAATACAATCCCCCAAATCACGCGGGGTTTGCGGCGCATTTTGAATTT
AGATGATCCCCAAAACCAGGAACCGACAGATTTACGGTTATTTGCCCAAAGCAATAGCGACGATGAAATTGATGCCCTCG
AAGAAGCCCGTCTAGCAGTGGAGCAAATCGTCATTCCCCAGGGTCAACCCGTGGAACTGCTGCCCCGTTCGGCCAAAATC
CGTAAGATGCAGCACGAACTGATTGAGCATTACCGTCTGCAATCATCGAGCTTTGGGGAAGAACCAAACCGTCGCCTGCG
GATTTTCCCTGCTTAA

Upstream 100 bases:

>100_bases
GCCCCCTCGAAACCGATCCCGAACGCTTTGACCAGGCGATCGCCCACGCCACCCAGTTGATAAATCCATTAAAATCTTCG
TTAAACCCAAGCCTTAGTCT

Downstream 100 bases:

>100_bases
TTCACCTCTAACGTCGAAGAAGTACTTCTGCCGAAGGTTTCGGCGTTGTATTGCAGTGACACTTCAGCCCCAGGATAGTC
AAAGCTGCCGGGGGTGATCG

Product: ATPase like protein

Products: NA

Alternate protein names: AAA ATPase; R3H Domain Protein; ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; Stage III Sporulation Protein IIIAA; Sporulation Stage III Protein AA; ATPase Like Protein

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSV
ERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVL
ADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV
QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTL
LRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLI
DQSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ
TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKI
RKMQHELIEHYRLQSSSFGEEPNRRLRIFPA

Sequences:

>Translated_591_residues
MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSV
ERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVL
ADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV
QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTL
LRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLI
DQSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ
TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKI
RKMQHELIEHYRLQSSSFGEEPNRRLRIFPA
>Mature_590_residues
TAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSVE
RVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLA
DDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQ
LVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTLL
RGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLID
QSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQT
CHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKIR
KMQHELIEHYRLQSSSFGEEPNRRLRIFPA

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66141; Mature: 66010

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCC
NSTEDLGDRPISREDLQYSVERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGR
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
AVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGD
HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
GDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV
CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVE
EEEECCCCHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
MLERQRWVVHSDVSITIDTLLRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKM
HHHHCCCEEECCCEEEHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
APEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLIDQSWIARDPQQQEKVRVPGP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHCCCCCCCCCEECCCC
NGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ
CCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAV
HHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
EQIVIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFPA
HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFE
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCC
NSTEDLGDRPISREDLQYSVERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGR
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
AVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGD
HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
GDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV
CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVE
EEEECCCCHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
MLERQRWVVHSDVSITIDTLLRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKM
HHHHCCCEEECCCEEEHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
APEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLIDQSWIARDPQQQEKVRVPGP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHCCCCCCCCCEECCCC
NGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ
CCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAV
HHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
EQIVIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFPA
HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA