| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170079162
Identifier: 170079162
GI number: 170079162
Start: 2674973
End: 2676517
Strand: Direct
Name: 170079162
Synonym: SYNPCC7002_A2568
Alternate gene names: NA
Gene position: 2674973-2676517 (Clockwise)
Preceding gene: 170079161
Following gene: 170079164
Centisome position: 88.93
GC content: 51.13
Gene sequence:
>1545_bases GTGCATAATCCTTCTTTCCAGACCTTTGCGGCATTACAACAGCAACTGCGCCAACGTTGGCAAGATTCGGCTGATTTTGA GGCGGACGATCAAGATATTTTAGTGGTGCCTTCTTTTAGTGTGGATCAGCGGGTCGGCCAGAAGGTGCCTGGATTTTTGC ACTATGAAGAGCGGTTACTGTTCTCACTAATTCGCCTGCGCAATCCCCACACGCGCTTGATTTACGTTACGGCCCAACCC CTAGCTCCTTTGATCATTGACTATTATCTCCAGCTCCTATCGGGAATTCCGTTTTCCCATGCCCGCGATCGCCTGCTGTT GGTGACCACCTATGATAATTCCTACAAACCTTTAACCCAAAAGATTTTGGAGCGGCCCCGGCTGGTGGAAAGAATTCGTC GCGCCCTGCGCCCGAACCAGTCCTATATGGTGTGTTACAACTCAACGCCCCTAGAACAGGAGCTATCGGAAAAACTACAG ATTCCCCTCTTTGCCGCCAGCCCCAGTCTGAACTATTGGGGTTCAAAAAGTGGCAGTCGTGAGATCTTTCAGACGGCGGG TGTTCCTTTTCCCGATGGCAGTGCTTTGGTGAAAACAGTGCCGGAATTGATCCAGGTTACGGCGCAACTGTGGGAGCGGC AACCCCACCTCAAACGGATTGTAATTAAGCTAAACGAGGGGTTTTCGGGGGAAGGGAATGCAGTGTTGAAGTTGCCTGCT CTGCCACAAAGTGCAAGTTTTACGGAACGTTGTGAACAGATTACGGCGGCTTTGCCCAAGCTCAGTTTCCAGGCCAGCGG TGAAACCTGGGATAATTTTGCCTCGCGCATTCCCGAATTAGGGGCGATCGCCGAAGCCTTTATCGAAGGAGATCCAAAGC GATCGCCCAGTGTCCAAGGGTTGATTACGCCCAGTGGTGAAGTCCAAATCCTCTCGACCCACGACCAAATTCTGGGGGGA CAGGATGGCCAAATTTACTTAGGATGCCATTTTCCAGCCGCCAGCGAATATCGCCTACAGTTACAGGAACTGGGCCTAAA AGTTGGCAAGATTCTCGCTGAAAAGGGAGCGATGGAACGCTATGGCGTCGATTTTATCGCTACCGAAAACCCCGACCACA GTTGGGATCTCCAGGCCATTGAAATTAATCTCCGCAAAGGGGGTACGACCCATCCGTTGATGACATTGCAACTGTTAACC AAAGGCTTCTATGACTGCGCTACAGGGTCATTTTTTACCCCCCAACACCAGAAAAAATACTACATCGCCTCTGACAATCT CCAGAAACCCCAATACCAGGGCCTCCTGCCCAGTGATTTGATGGATATCATCGCCGCCCATGGCCTCCATTTCGACAGCA GTACGAAAACAGGGAGCGTGTTTCACCTGATGGGCACCCTTTCAGAATTTGGCAAATTAGGGCTGACCAGCATTGGGAAT TCTCCCGAAGAAGCCGCCCAAATTTATCAACAGGTCGAGCAAGCTTTGGATTTAGAGACAACCAGTCAACGCCCTGCAAC GGTGACGCTTCCCTTGACGTGGTAA
Upstream 100 bases:
>100_bases TAAGTGTTGTTTAGCTTTTTTGTAAGCTGGACAGAAAATTTTAAGATCAGACGTAGGGTGGTCAAAAACGATCCTATGAG TTTGATCTGGGCAAAAAACG
Downstream 100 bases:
>100_bases GTCTTTTCTAAGGAACCTCAATCCGTATTCTTGGGGAACATGCCACAGCACCATCTTTGAGAAGGGCTGAGGGCTTTAAT ACTTGCGCTCTTTGGGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MHNPSFQTFAALQQQLRQRWQDSADFEADDQDILVVPSFSVDQRVGQKVPGFLHYEERLLFSLIRLRNPHTRLIYVTAQP LAPLIIDYYLQLLSGIPFSHARDRLLLVTTYDNSYKPLTQKILERPRLVERIRRALRPNQSYMVCYNSTPLEQELSEKLQ IPLFAASPSLNYWGSKSGSREIFQTAGVPFPDGSALVKTVPELIQVTAQLWERQPHLKRIVIKLNEGFSGEGNAVLKLPA LPQSASFTERCEQITAALPKLSFQASGETWDNFASRIPELGAIAEAFIEGDPKRSPSVQGLITPSGEVQILSTHDQILGG QDGQIYLGCHFPAASEYRLQLQELGLKVGKILAEKGAMERYGVDFIATENPDHSWDLQAIEINLRKGGTTHPLMTLQLLT KGFYDCATGSFFTPQHQKKYYIASDNLQKPQYQGLLPSDLMDIIAAHGLHFDSSTKTGSVFHLMGTLSEFGKLGLTSIGN SPEEAAQIYQQVEQALDLETTSQRPATVTLPLTW
Sequences:
>Translated_514_residues MHNPSFQTFAALQQQLRQRWQDSADFEADDQDILVVPSFSVDQRVGQKVPGFLHYEERLLFSLIRLRNPHTRLIYVTAQP LAPLIIDYYLQLLSGIPFSHARDRLLLVTTYDNSYKPLTQKILERPRLVERIRRALRPNQSYMVCYNSTPLEQELSEKLQ IPLFAASPSLNYWGSKSGSREIFQTAGVPFPDGSALVKTVPELIQVTAQLWERQPHLKRIVIKLNEGFSGEGNAVLKLPA LPQSASFTERCEQITAALPKLSFQASGETWDNFASRIPELGAIAEAFIEGDPKRSPSVQGLITPSGEVQILSTHDQILGG QDGQIYLGCHFPAASEYRLQLQELGLKVGKILAEKGAMERYGVDFIATENPDHSWDLQAIEINLRKGGTTHPLMTLQLLT KGFYDCATGSFFTPQHQKKYYIASDNLQKPQYQGLLPSDLMDIIAAHGLHFDSSTKTGSVFHLMGTLSEFGKLGLTSIGN SPEEAAQIYQQVEQALDLETTSQRPATVTLPLTW >Mature_514_residues MHNPSFQTFAALQQQLRQRWQDSADFEADDQDILVVPSFSVDQRVGQKVPGFLHYEERLLFSLIRLRNPHTRLIYVTAQP LAPLIIDYYLQLLSGIPFSHARDRLLLVTTYDNSYKPLTQKILERPRLVERIRRALRPNQSYMVCYNSTPLEQELSEKLQ IPLFAASPSLNYWGSKSGSREIFQTAGVPFPDGSALVKTVPELIQVTAQLWERQPHLKRIVIKLNEGFSGEGNAVLKLPA LPQSASFTERCEQITAALPKLSFQASGETWDNFASRIPELGAIAEAFIEGDPKRSPSVQGLITPSGEVQILSTHDQILGG QDGQIYLGCHFPAASEYRLQLQELGLKVGKILAEKGAMERYGVDFIATENPDHSWDLQAIEINLRKGGTTHPLMTLQLLT KGFYDCATGSFFTPQHQKKYYIASDNLQKPQYQGLLPSDLMDIIAAHGLHFDSSTKTGSVFHLMGTLSEFGKLGLTSIGN SPEEAAQIYQQVEQALDLETTSQRPATVTLPLTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI72534720, Length=509, Percent_Identity=22.7897838899804, Blast_Score=112, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57496; Mature: 57496
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50975 ATP_GRASP ; PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNPSFQTFAALQQQLRQRWQDSADFEADDQDILVVPSFSVDQRVGQKVPGFLHYEERLL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHH FSLIRLRNPHTRLIYVTAQPLAPLIIDYYLQLLSGIPFSHARDRLLLVTTYDNSYKPLTQ HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH KILERPRLVERIRRALRPNQSYMVCYNSTPLEQELSEKLQIPLFAASPSLNYWGSKSGSR HHHHCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCH EIFQTAGVPFPDGSALVKTVPELIQVTAQLWERQPHLKRIVIKLNEGFSGEGNAVLKLPA HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECC LPQSASFTERCEQITAALPKLSFQASGETWDNFASRIPELGAIAEAFIEGDPKRSPSVQG CCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCE LITPSGEVQILSTHDQILGGQDGQIYLGCHFPAASEYRLQLQELGLKVGKILAEKGAMER EECCCCCEEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH YGVDFIATENPDHSWDLQAIEINLRKGGTTHPLMTLQLLTKGFYDCATGSFFTPQHQKKY HCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE YIASDNLQKPQYQGLLPSDLMDIIAAHGLHFDSSTKTGSVFHLMGTLSEFGKLGLTSIGN EEECCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC SPEEAAQIYQQVEQALDLETTSQRPATVTLPLTW CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC >Mature Secondary Structure MHNPSFQTFAALQQQLRQRWQDSADFEADDQDILVVPSFSVDQRVGQKVPGFLHYEERLL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHH FSLIRLRNPHTRLIYVTAQPLAPLIIDYYLQLLSGIPFSHARDRLLLVTTYDNSYKPLTQ HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH KILERPRLVERIRRALRPNQSYMVCYNSTPLEQELSEKLQIPLFAASPSLNYWGSKSGSR HHHHCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCH EIFQTAGVPFPDGSALVKTVPELIQVTAQLWERQPHLKRIVIKLNEGFSGEGNAVLKLPA HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECC LPQSASFTERCEQITAALPKLSFQASGETWDNFASRIPELGAIAEAFIEGDPKRSPSVQG CCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCE LITPSGEVQILSTHDQILGGQDGQIYLGCHFPAASEYRLQLQELGLKVGKILAEKGAMER EECCCCCEEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH YGVDFIATENPDHSWDLQAIEINLRKGGTTHPLMTLQLLTKGFYDCATGSFFTPQHQKKY HCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE YIASDNLQKPQYQGLLPSDLMDIIAAHGLHFDSSTKTGSVFHLMGTLSEFGKLGLTSIGN EEECCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC SPEEAAQIYQQVEQALDLETTSQRPATVTLPLTW CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA