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The map label for this gene is 170079156

Identifier: 170079156

GI number: 170079156

Start: 2670968

End: 2671780

Strand: Direct

Name: 170079156

Synonym: SYNPCC7002_A2562

Alternate gene names: NA

Gene position: 2670968-2671780 (Clockwise)

Preceding gene: 170079155

Following gene: 170079158

Centisome position: 88.79

GC content: 54.0

Gene sequence:

>813_bases
ATGGTGCGTATTTTTTCTGGGCTGTTGGGTGGTATGGGTCTAGCCTTGGTTTTGGGAGGAACATTAACGCCGGCGATCGC
CCAAGCGCGCCCCTGTGGTTCGACTCCTTGCCTCTTCGCCCAAGGTGCTGGCATGACCGCCGATTCAGTGGATGAATTGG
TATTCCAGGGCAATGAATATTATGACCAAGGGCAATATGAACTGGCCCTCGCAGCCTACGATGCCGCCTTAATTTTGAAT
GCGAACGATGCAGAGCTTTGGATCTGGCGGGGCGTTACCCTAGGGGCCTTGGGGCAGCACGAAGAGGAATTGGCCAGCTA
TGATCAGGCGATCGCCCTTGACCCCGATCAAAACCTGGTGTGGTACAACCGGGGCGTTGTGTTAGGAGCTTTAGAGCGCT
ACGAAGAAGAACTGGCCAGCTATGACCGCGCCCTGGAACTGGATCCGGGGGATGTGGATGCTTGGTATAACCGGGGTATT
GCCCTGGGCTTTCTGGAACGCTATGAAGAAGAATTAGCCAGCTACGATCAAGTACTAGCGTTAGATCCCGCAGATGTGGA
TGCTTGGTTCAATAAAGGCTATGTTCTGGCCGATTTAGGTCGCCATGAAGAAGCGATCGCCACCTATGCCGCCCTCCTAG
AACTCGATCCCGACGACGCCGAAGCCTGGAATAATCACGGTATTTCCCTCGAAGCACTGGGGCGCTATACCGAGGCGATC
GCCAGCTATGACCAAGCCCTCGCCATTGACCCAGACTACGAAGACGCTTTGATTAATCGAGAAATTGCCCAAGCTGCCCT
AGAACAACTTTAA

Upstream 100 bases:

>100_bases
TTGATTGTAAACATCTCCCCCTAGGAAAAGCAGCGGCAACGGTAATTCTGACTATGATGGAAGATATTGGACGAACGGCA
ATATTTGGTGGAGTGTTCCC

Downstream 100 bases:

>100_bases
ACTTCAACTAAATCAATCTTTATCAAAAAAAATACCCAGCTTCGGTGATGGGTATTGCTTCAGCTTATAAATTTGGCTCA
ATTTCTTTCTATTGATGGCT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MVRIFSGLLGGMGLALVLGGTLTPAIAQARPCGSTPCLFAQGAGMTADSVDELVFQGNEYYDQGQYELALAAYDAALILN
ANDAELWIWRGVTLGALGQHEEELASYDQAIALDPDQNLVWYNRGVVLGALERYEEELASYDRALELDPGDVDAWYNRGI
ALGFLERYEEELASYDQVLALDPADVDAWFNKGYVLADLGRHEEAIATYAALLELDPDDAEAWNNHGISLEALGRYTEAI
ASYDQALAIDPDYEDALINREIAQAALEQL

Sequences:

>Translated_270_residues
MVRIFSGLLGGMGLALVLGGTLTPAIAQARPCGSTPCLFAQGAGMTADSVDELVFQGNEYYDQGQYELALAAYDAALILN
ANDAELWIWRGVTLGALGQHEEELASYDQAIALDPDQNLVWYNRGVVLGALERYEEELASYDRALELDPGDVDAWYNRGI
ALGFLERYEEELASYDQVLALDPADVDAWFNKGYVLADLGRHEEAIATYAALLELDPDDAEAWNNHGISLEALGRYTEAI
ASYDQALAIDPDYEDALINREIAQAALEQL
>Mature_270_residues
MVRIFSGLLGGMGLALVLGGTLTPAIAQARPCGSTPCLFAQGAGMTADSVDELVFQGNEYYDQGQYELALAAYDAALILN
ANDAELWIWRGVTLGALGQHEEELASYDQAIALDPDQNLVWYNRGVVLGALERYEEELASYDRALELDPGDVDAWYNRGI
ALGFLERYEEELASYDQVLALDPADVDAWFNKGYVLADLGRHEEAIATYAALLELDPDDAEAWNNHGISLEALGRYTEAI
ASYDQALAIDPDYEDALINREIAQAALEQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=203, Percent_Identity=30.5418719211823, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI32307148, Length=203, Percent_Identity=30.5418719211823, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI310131789, Length=189, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310110582, Length=189, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310123097, Length=189, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI301336134, Length=204, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI83415184, Length=218, Percent_Identity=26.1467889908257, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI224809432, Length=162, Percent_Identity=29.0123456790123, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI118766330, Length=180, Percent_Identity=27.2222222222222, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI118766328, Length=162, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=203, Percent_Identity=28.0788177339901, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=203, Percent_Identity=28.0788177339901, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25147174, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6319387, Length=213, Percent_Identity=25.8215962441315, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17647755, Length=203, Percent_Identity=30.0492610837438, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585827, Length=203, Percent_Identity=30.0492610837438, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585829, Length=203, Percent_Identity=30.0492610837438, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24647123, Length=201, Percent_Identity=29.3532338308458, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161076610, Length=162, Percent_Identity=30.8641975308642, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 29519; Mature: 29519

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIFSGLLGGMGLALVLGGTLTPAIAQARPCGSTPCLFAQGAGMTADSVDELVFQGNEY
CHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
YDQGQYELALAAYDAALILNANDAELWIWRGVTLGALGQHEEELASYDQAIALDPDQNLV
CCCCCEEEEEEEECEEEEEECCCCEEEEECCCEECCCCCCHHHHHCCCCEEEECCCCCEE
WYNRGVVLGALERYEEELASYDRALELDPGDVDAWYNRGIALGFLERYEEELASYDQVLA
EEECCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCHHCEEE
LDPADVDAWFNKGYVLADLGRHEEAIATYAALLELDPDDAEAWNNHGISLEALGRYTEAI
ECCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHH
ASYDQALAIDPDYEDALINREIAQAALEQL
HHCCCEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRIFSGLLGGMGLALVLGGTLTPAIAQARPCGSTPCLFAQGAGMTADSVDELVFQGNEY
CHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
YDQGQYELALAAYDAALILNANDAELWIWRGVTLGALGQHEEELASYDQAIALDPDQNLV
CCCCCEEEEEEEECEEEEEECCCCEEEEECCCEECCCCCCHHHHHCCCCEEEECCCCCEE
WYNRGVVLGALERYEEELASYDRALELDPGDVDAWYNRGIALGFLERYEEELASYDQVLA
EEECCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHCHHCEEE
LDPADVDAWFNKGYVLADLGRHEEAIATYAALLELDPDDAEAWNNHGISLEALGRYTEAI
ECCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHH
ASYDQALAIDPDYEDALINREIAQAALEQL
HHCCCEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]