Click here to switch to the map view.

The map label for this gene is psbZ

Identifier: 170079127

GI number: 170079127

Start: 2638975

End: 2639388

Strand: Direct

Name: psbZ

Synonym: SYNPCC7002_A2533

Alternate gene names: NA

Gene position: 2638975-2639388 (Clockwise)

Preceding gene: 170079126

Following gene: 170079129

Centisome position: 87.73

GC content: 47.1

Gene sequence:

>414_bases
ATGTTAAAGAAATTTTTATCTCGCCTCGTGGCCTTTGTATTAGTCGTAATGGTGAGCGTAACCGGACTAACAGCCTGTAG
TGGTGCCAGTGCCAGTGGCCTAACCGGGAAATATGTTGACGATACTTTACTCGTTGTCGAAAATCTGACCGAAGCAATTC
AACTCCCTGCCGATGCCCCCAACCGCAGCGAAGTACAAGCAGCGGCCCGCTTGCAGATGAATGAATATATGTCCCGCTAC
CGTCGTGATCCCAAAACCTCCGGGTTGCGTTCTTTCACCACCATGCAAACTGCTCTGAATGCTTTGGCTGGCTATTACAG
TTCTTTCGGCAGTCGCCCCTTGCCTGAAAAATTAAAAACACGTTTAGCGACAGAATTTGAAACAGCTAATATTGCTGTCA
AACGTGGTATTTAA

Upstream 100 bases:

>100_bases
TAATTTTCAAAACTAATCCCCAGCCGTATCGCAGACAAGGCTAAACTTTCGCGGTAGGATAACAGTTAGCTCTAAGCGTG
CTTTTTTATACCGAAAAACT

Downstream 100 bases:

>100_bases
TCGTTCACTTGAATCCTACATTGTTTGACTAATATTTTGTAATCTCTCCTTAAAAAACTTAGGGGAGATTTTTGATTTTA
GTAAGTCAGAAACACTGGCT

Product: photosystem II 11 kD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLKKFLSRLVAFVLVVMVSVTGLTACSGASASGLTGKYVDDTLLVVENLTEAIQLPADAPNRSEVQAAARLQMNEYMSRY
RRDPKTSGLRSFTTMQTALNALAGYYSSFGSRPLPEKLKTRLATEFETANIAVKRGI

Sequences:

>Translated_137_residues
MLKKFLSRLVAFVLVVMVSVTGLTACSGASASGLTGKYVDDTLLVVENLTEAIQLPADAPNRSEVQAAARLQMNEYMSRY
RRDPKTSGLRSFTTMQTALNALAGYYSSFGSRPLPEKLKTRLATEFETANIAVKRGI
>Mature_137_residues
MLKKFLSRLVAFVLVVMVSVTGLTACSGASASGLTGKYVDDTLLVVENLTEAIQLPADAPNRSEVQAAARLQMNEYMSRY
RRDPKTSGLRSFTTMQTALNALAGYYSSFGSRPLPEKLKTRLATEFETANIAVKRGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017488 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14926; Mature: 14926

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKFLSRLVAFVLVVMVSVTGLTACSGASASGLTGKYVDDTLLVVENLTEAIQLPADAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
NRSEVQAAARLQMNEYMSRYRRDPKTSGLRSFTTMQTALNALAGYYSSFGSRPLPEKLKT
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RLATEFETANIAVKRGI
HHHHHHHHHHEEHCCCC
>Mature Secondary Structure
MLKKFLSRLVAFVLVVMVSVTGLTACSGASASGLTGKYVDDTLLVVENLTEAIQLPADAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
NRSEVQAAARLQMNEYMSRYRRDPKTSGLRSFTTMQTALNALAGYYSSFGSRPLPEKLKT
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RLATEFETANIAVKRGI
HHHHHHHHHHEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]