| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hisH [H]
Identifier: 170079123
GI number: 170079123
Start: 2635219
End: 2635845
Strand: Direct
Name: hisH [H]
Synonym: SYNPCC7002_A2529
Alternate gene names: 170079123
Gene position: 2635219-2635845 (Clockwise)
Preceding gene: 170079122
Following gene: 170079124
Centisome position: 87.61
GC content: 50.88
Gene sequence:
>627_bases ATGGTGAATATTGCGGTTGTTGACTACGACATGGGGAATCTCCACTCCGCCTGCAAAGCCCTAGAAAAAGCGGGGGCAAC TCCCACAATCACGGATCAATCAGAACAAATCCTGGGGGCCGATGCGGTAGTTCTACCGGGGGTTGGGGCGTTTGATCCGG CGATGCAACATCTCCGCGATCGCCACCTCGAAGCCTCGATTAACCAGGCGATCGCCAGTGGCAAACCCTTCCTCGGCATT TGTTTGGGGATGCAAATTTTATTTGACAGTTCCGCCGAAGGCACAGAAAAAGGTTTAGGTATTATCCCTGGCAGGGTGAA ACGCTTTCAGCCAGAGCCAGAGATTACCATTCCCCACATGGGCTGGAACCAACTGCAACTAACCCAACCGGATCATCCCA TTTGGCAGGATTTACCGAAAGATCCCTTCGTTTATTTTGTGCATTCTTTTTATGTGGCCCCGACAGATCCTGAAGTAAAT GCCGCCACCGTCACCCACGGCCAGCAAACTGTCACAGCGGCGATCGCCAAAGATAACTTAGTTGCGATGCAATTTCACCC CGAAAAATCCTCAGCGATTGGCCTAAAAATCCTCGAAAATTTTGTGCACTGGGTTAAGCAGCAATGA
Upstream 100 bases:
>100_bases TGAAAGTTAAGCGTCAACATTCTAAAGAAATTGTTAGGATCAAATTCCTTTTGTGGTGTATGTTAGGGGTTTCTAACGTG AACGTTCGGGCAATGAGAAG
Downstream 100 bases:
>100_bases AATTCTTCAAGTCTCTTGCAGAAAAATGATTTAGAGATTTATCAAAGTCTCCCTTCCGAAGAGAGATTTAGAGGGATGTC CCCCTTTCCCAATCAACTTT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVNIAVVDYDMGNLHSACKALEKAGATPTITDQSEQILGADAVVLPGVGAFDPAMQHLRDRHLEASINQAIASGKPFLGI CLGMQILFDSSAEGTEKGLGIIPGRVKRFQPEPEITIPHMGWNQLQLTQPDHPIWQDLPKDPFVYFVHSFYVAPTDPEVN AATVTHGQQTVTAAIAKDNLVAMQFHPEKSSAIGLKILENFVHWVKQQ
Sequences:
>Translated_208_residues MVNIAVVDYDMGNLHSACKALEKAGATPTITDQSEQILGADAVVLPGVGAFDPAMQHLRDRHLEASINQAIASGKPFLGI CLGMQILFDSSAEGTEKGLGIIPGRVKRFQPEPEITIPHMGWNQLQLTQPDHPIWQDLPKDPFVYFVHSFYVAPTDPEVN AATVTHGQQTVTAAIAKDNLVAMQFHPEKSSAIGLKILENFVHWVKQQ >Mature_208_residues MVNIAVVDYDMGNLHSACKALEKAGATPTITDQSEQILGADAVVLPGVGAFDPAMQHLRDRHLEASINQAIASGKPFLGI CLGMQILFDSSAEGTEKGLGIIPGRVKRFQPEPEITIPHMGWNQLQLTQPDHPIWQDLPKDPFVYFVHSFYVAPTDPEVN AATVTHGQQTVTAAIAKDNLVAMQFHPEKSSAIGLKILENFVHWVKQQ
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=203, Percent_Identity=37.4384236453202, Blast_Score=122, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=218, Percent_Identity=35.3211009174312, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22713; Mature: 22713
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIAVVDYDMGNLHSACKALEKAGATPTITDQSEQILGADAVVLPGVGAFDPAMQHLRD CEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHH RHLEASINQAIASGKPFLGICLGMQILFDSSAEGTEKGLGIIPGRVKRFQPEPEITIPHM HHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCCCCCEEECCC GWNQLQLTQPDHPIWQDLPKDPFVYFVHSFYVAPTDPEVNAATVTHGQQTVTAAIAKDNL CCCEEEEECCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECCCHHEEEEEECCCE VAMQFHPEKSSAIGLKILENFVHWVKQQ EEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVNIAVVDYDMGNLHSACKALEKAGATPTITDQSEQILGADAVVLPGVGAFDPAMQHLRD CEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHH RHLEASINQAIASGKPFLGICLGMQILFDSSAEGTEKGLGIIPGRVKRFQPEPEITIPHM HHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCCCCCEEECCC GWNQLQLTQPDHPIWQDLPKDPFVYFVHSFYVAPTDPEVNAATVTHGQQTVTAAIAKDNL CCCEEEEECCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECCCHHEEEEEECCCE VAMQFHPEKSSAIGLKILENFVHWVKQQ EEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA