Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079116

Identifier: 170079116

GI number: 170079116

Start: 2630286

End: 2631026

Strand: Reverse

Name: 170079116

Synonym: SYNPCC7002_A2521

Alternate gene names: NA

Gene position: 2631026-2630286 (Counterclockwise)

Preceding gene: 170079128

Following gene: 170079114

Centisome position: 87.47

GC content: 54.12

Gene sequence:

>741_bases
ATGGATCCCATGCTCAAAGATGCCTTTGCTCAACGTCGGGCATTAAAAGTCATTAGTGGTTTGAATAACTTTGATGCGAC
CAATGTTCTCGCTGTGGCCCGGGCAGCCGAAGCCGGTGGCGCAACCTTTGTCGATATTGCCGCCGATGCAGATTTGATTC
GTCAGGTGAAAGAAGTCATTTCTCTGCCTGTATGTGTGTCTGGGGTTGATGCTCAAGTTTTAGCTGATGCGGTTGAAGCA
GGGGCTGATCTTGTGGAAATTGGAAACTTTGATGCATTCTACGCCCAGGGGATTCGCTTTGAGGCAGAAGAAGTGCTGGC
AATCACCAAGAAAACCCGCTCCTTACTTCCCGATGTCACCCTGTCTGTGACTGTTCCCCATATTCTCGCCCTCGATGAGC
AGGTCGCCCTCGCCGAACAACTCGTGGCAGCGGGTGCAGATATTATCCAAACAGAAGGGGGGACTTCCAGCCGTCCCACC
AGCGCTGGAACCCTCGGTTTAATCGAAAAGGCAGCACCCACCTTGGCTGCAGCCCATGCCATTTCCCGCGCGGTAGATGT
CCCTGTGATGTGTGCGTCTGGGTTGTCTGATGTGACAGCTCCCATGGCGATCGCCGCTGGTGCTGCTGGGATTGGCGTCG
GCTCTGCAATCAACAAACTCAACGATCCCTTGGCAATGGTGGCAACGGTGCGCCAATTAGTCGAGGCCCTCGATGGTGCT
GTTGTGGGCGTAGAAGCTTAA

Upstream 100 bases:

>100_bases
CGCGAACAATTTTACCGAGTCAGGCGATCCAGCGGCGAAGGAAGGAACATTGAAGGATACACTAGAGGGAAGCAAAAATT
TTGAATAACTGTTTGATTCT

Downstream 100 bases:

>100_bases
AATTTCGTGCCAACAGTTTCGGTTGAGGCCAAAATAAAACCCTCCATCGTGCATGGGGGGCTTTATGTTAGGAGTTTTAT
TTCTTGCTTCTCAGAACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA
GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT
SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA
VVGVEA

Sequences:

>Translated_246_residues
MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA
GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT
SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA
VVGVEA
>Mature_246_residues
MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA
GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT
SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA
VVGVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24937; Mature: 24937

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVI
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
SLPVCVSGVDAQVLADAVEAGADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVT
CCCHHCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE
LSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPTSAGTLGLIEKAAPTLAAAHA
EEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA
HHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
VVGVEA
EEECCC
>Mature Secondary Structure
MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVI
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
SLPVCVSGVDAQVLADAVEAGADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVT
CCCHHCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE
LSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPTSAGTLGLIEKAAPTLAAAHA
EEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA
HHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
VVGVEA
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA