| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079116
Identifier: 170079116
GI number: 170079116
Start: 2630286
End: 2631026
Strand: Reverse
Name: 170079116
Synonym: SYNPCC7002_A2521
Alternate gene names: NA
Gene position: 2631026-2630286 (Counterclockwise)
Preceding gene: 170079128
Following gene: 170079114
Centisome position: 87.47
GC content: 54.12
Gene sequence:
>741_bases ATGGATCCCATGCTCAAAGATGCCTTTGCTCAACGTCGGGCATTAAAAGTCATTAGTGGTTTGAATAACTTTGATGCGAC CAATGTTCTCGCTGTGGCCCGGGCAGCCGAAGCCGGTGGCGCAACCTTTGTCGATATTGCCGCCGATGCAGATTTGATTC GTCAGGTGAAAGAAGTCATTTCTCTGCCTGTATGTGTGTCTGGGGTTGATGCTCAAGTTTTAGCTGATGCGGTTGAAGCA GGGGCTGATCTTGTGGAAATTGGAAACTTTGATGCATTCTACGCCCAGGGGATTCGCTTTGAGGCAGAAGAAGTGCTGGC AATCACCAAGAAAACCCGCTCCTTACTTCCCGATGTCACCCTGTCTGTGACTGTTCCCCATATTCTCGCCCTCGATGAGC AGGTCGCCCTCGCCGAACAACTCGTGGCAGCGGGTGCAGATATTATCCAAACAGAAGGGGGGACTTCCAGCCGTCCCACC AGCGCTGGAACCCTCGGTTTAATCGAAAAGGCAGCACCCACCTTGGCTGCAGCCCATGCCATTTCCCGCGCGGTAGATGT CCCTGTGATGTGTGCGTCTGGGTTGTCTGATGTGACAGCTCCCATGGCGATCGCCGCTGGTGCTGCTGGGATTGGCGTCG GCTCTGCAATCAACAAACTCAACGATCCCTTGGCAATGGTGGCAACGGTGCGCCAATTAGTCGAGGCCCTCGATGGTGCT GTTGTGGGCGTAGAAGCTTAA
Upstream 100 bases:
>100_bases CGCGAACAATTTTACCGAGTCAGGCGATCCAGCGGCGAAGGAAGGAACATTGAAGGATACACTAGAGGGAAGCAAAAATT TTGAATAACTGTTTGATTCT
Downstream 100 bases:
>100_bases AATTTCGTGCCAACAGTTTCGGTTGAGGCCAAAATAAAACCCTCCATCGTGCATGGGGGGCTTTATGTTAGGAGTTTTAT TTCTTGCTTCTCAGAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA VVGVEA
Sequences:
>Translated_246_residues MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA VVGVEA >Mature_246_residues MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVISLPVCVSGVDAQVLADAVEA GADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVTLSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPT SAGTLGLIEKAAPTLAAAHAISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA VVGVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24937; Mature: 24937
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVI CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH SLPVCVSGVDAQVLADAVEAGADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVT CCCHHCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE LSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPTSAGTLGLIEKAAPTLAAAHA EEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA HHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC VVGVEA EEECCC >Mature Secondary Structure MDPMLKDAFAQRRALKVISGLNNFDATNVLAVARAAEAGGATFVDIAADADLIRQVKEVI CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH SLPVCVSGVDAQVLADAVEAGADLVEIGNFDAFYAQGIRFEAEEVLAITKKTRSLLPDVT CCCHHCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCE LSVTVPHILALDEQVALAEQLVAAGADIIQTEGGTSSRPTSAGTLGLIEKAAPTLAAAHA EEEEHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ISRAVDVPVMCASGLSDVTAPMAIAAGAAGIGVGSAINKLNDPLAMVATVRQLVEALDGA HHHHHCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC VVGVEA EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA