Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is yqiK [C]

Identifier: 170079105

GI number: 170079105

Start: 2617192

End: 2619165

Strand: Reverse

Name: yqiK [C]

Synonym: SYNPCC7002_A2510

Alternate gene names: 170079105

Gene position: 2619165-2617192 (Counterclockwise)

Preceding gene: 170079107

Following gene: 170079104

Centisome position: 87.07

GC content: 51.37

Gene sequence:

>1974_bases
ATGAAGTTTTGGTTTACCCTGCTCCAATCTCTGCCTGAACTGAGCACCATGGATGTAGAGTTACTCGATTCCAAAATCGA
CGCCCAGGCACTGCGGCTTGATCCGCATCCCACCTCCCCGGCCTCGGCCACCCTGACCCCCGCCCAACTCCCTGTTAGTG
GCGCGTTGATCTTTCCAGGCATTATCGTCACCCTGATTGTGCTCTTTTTGATGAGCATTTGGGCCTACACCAGGGTCTAT
GTCATTACCCCCAACAACGAAGCCTTTGTCCGTACCGGGGGCGTGATTCGCAAAAAGAAAACGGTCATTCTCAACGGAGG
TTGCATTGTTTTACCGGGATTCCACGAGTTAACTCGCGTACCGCTGCGAGAAATTTCCATCGATGTCGAACGTACCGGAA
ACCTCGCTGTCCGCACCCAAGATTACCTGCGGGCAAATATGCGGGTCACATTTTACGTTTGTATCAATGCCAATGAAGAA
GATGTTTTAGTCGCCGCCGCCCGGTTATCCAAGCAGGGGCGCATTTCCGAAGCAGATATCAAAGAAGCCCTGGAGAAACG
AGCCGATGACGCGATTCGGGCCGCCGCTAAACGCAAAAGCATTGCCGAAATTGATTCTGACAAACTGGGATTTGCTGACG
AGGTTTTGAATCTAATTCAGCAGGATCTCAAGAAAGTAGGTTTGACTCTCAACAATATTGCCATTTCTGAAATCGAAGAA
AGCGACACCTACGATGAAAATAATTTCTTCGATGCCCAAGGCGTCCGCCTCCGCACGGAAACAATCCAAAAATCCATTAA
ACAAAAACTCGATGTTGAGCTAACGGTGCTGAAGGAAAAGCGGGAGCTAGAACTCAACACCAAGGTAGAAATCGAAGAAC
AGGAACTCGCCGCCGAACAAAAATCCCTGAAGCTGGCTAAGGCGAAGGAAGAAGCCAAGCTCAATCAAGCGAAGGAAATT
GAATTCCTCAAGGCACAACAGGCCCAGGAAATTCAGGCATCCCAGGATCAAGAATTAGCCAAGATTGAACGCAATCGCAT
TCTTCAGGAAAAGGCCGTCGAAGAGGAGAAAATTCAACAGAAACTTTCGATTCAGCAAAATCAAATTGCCGCCGATATTT
CCCTCGAACAGCAAAATAAAGCCCTCAAAATTGCCATGGCGGAGGCGGAAGAGGAAGCAAAAATCGCCCAACAGCAGGCG
GCGATCGCCATTGCCAATAAAGAAAAAGAACGCCTCGCCGCCGAGGCCGAACGCACCCGGGCCGAAGAAGCTGTGGCCAC
CTCCAAGGCCGTCGAACAGGCCAACCGGGAACAACGCCTGGCGATCATTGATGCTGAAAAAGAAGCCGATCAAAAACGCA
TCGCTGACCAAAACGTGGTGGAAATCGATGTGTTCCGGCGGCGGCGTCAAGCAGAAATTGCCCGTCAAGCGGCGGAACTA
GAGGCCGAATCGATCCGCACCCTGGCCGATGCCAACCGCTACCAAGCCCTCGCCGAGGCCCAGGGGAAACAGGCTCTAAT
CGAAGCAGAAAATGCCCTGAGCAATGCCAACCGCACTGCGGAATTGATGAAGCTCTTTTTACCGACCCTCGCCGACCAAC
TGCCAGACATTATGAAATCCCTCGCTCCCCAACCCGGCGTCCTGGGCGATGCAAAAGTATTTGCCTTTCCGGGCACCAAT
GGCGATGGGGCTGGCCTGGGGGAGATTAATAAATTGTTGCTCTCGACGAGCGGTTTGTCGTTGGTCAATGGTCTTTTAGA
AGACGGTAAATTGGGGACGCTGTTGGCCCAGGTGAAAGGCTTGTTGCAGGATAACGATGCAGACACCAGCAATAACGAGG
TGTTGCAAAATGTGGAAACTCTCCTGGCTGAGTTAAAAGAGAAAAAGACAACGACAACATCCTCTGAAACCTCGCCGCTA
CCCACTACTTTTGTCCCGCTGCCCAAGGAGGCAAAAGATTCTGAAGGGGCATAA

Upstream 100 bases:

>100_bases
TCATCGGACAGATGTAAATATTGTTGCGTGAATCGCTTGATTCCCAGGGGACACGGGCAAAATAAAAACAGAATGCCCGT
TACCAAAGGATGCGTGCCCC

Downstream 100 bases:

>100_bases
TTTTTTCAGGGATTCTTAAACTCGATTTTCCAAAAAGGCGATCGCCAACCGAGCGAGGGAATACGCTACGATCACAAACG
ATGTGAATTTAGCGGCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MKFWFTLLQSLPELSTMDVELLDSKIDAQALRLDPHPTSPASATLTPAQLPVSGALIFPGIIVTLIVLFLMSIWAYTRVY
VITPNNEAFVRTGGVIRKKKTVILNGGCIVLPGFHELTRVPLREISIDVERTGNLAVRTQDYLRANMRVTFYVCINANEE
DVLVAAARLSKQGRISEADIKEALEKRADDAIRAAAKRKSIAEIDSDKLGFADEVLNLIQQDLKKVGLTLNNIAISEIEE
SDTYDENNFFDAQGVRLRTETIQKSIKQKLDVELTVLKEKRELELNTKVEIEEQELAAEQKSLKLAKAKEEAKLNQAKEI
EFLKAQQAQEIQASQDQELAKIERNRILQEKAVEEEKIQQKLSIQQNQIAADISLEQQNKALKIAMAEAEEEAKIAQQQA
AIAIANKEKERLAAEAERTRAEEAVATSKAVEQANREQRLAIIDAEKEADQKRIADQNVVEIDVFRRRRQAEIARQAAEL
EAESIRTLADANRYQALAEAQGKQALIEAENALSNANRTAELMKLFLPTLADQLPDIMKSLAPQPGVLGDAKVFAFPGTN
GDGAGLGEINKLLLSTSGLSLVNGLLEDGKLGTLLAQVKGLLQDNDADTSNNEVLQNVETLLAELKEKKTTTTSSETSPL
PTTFVPLPKEAKDSEGA

Sequences:

>Translated_657_residues
MKFWFTLLQSLPELSTMDVELLDSKIDAQALRLDPHPTSPASATLTPAQLPVSGALIFPGIIVTLIVLFLMSIWAYTRVY
VITPNNEAFVRTGGVIRKKKTVILNGGCIVLPGFHELTRVPLREISIDVERTGNLAVRTQDYLRANMRVTFYVCINANEE
DVLVAAARLSKQGRISEADIKEALEKRADDAIRAAAKRKSIAEIDSDKLGFADEVLNLIQQDLKKVGLTLNNIAISEIEE
SDTYDENNFFDAQGVRLRTETIQKSIKQKLDVELTVLKEKRELELNTKVEIEEQELAAEQKSLKLAKAKEEAKLNQAKEI
EFLKAQQAQEIQASQDQELAKIERNRILQEKAVEEEKIQQKLSIQQNQIAADISLEQQNKALKIAMAEAEEEAKIAQQQA
AIAIANKEKERLAAEAERTRAEEAVATSKAVEQANREQRLAIIDAEKEADQKRIADQNVVEIDVFRRRRQAEIARQAAEL
EAESIRTLADANRYQALAEAQGKQALIEAENALSNANRTAELMKLFLPTLADQLPDIMKSLAPQPGVLGDAKVFAFPGTN
GDGAGLGEINKLLLSTSGLSLVNGLLEDGKLGTLLAQVKGLLQDNDADTSNNEVLQNVETLLAELKEKKTTTTSSETSPL
PTTFVPLPKEAKDSEGA
>Mature_657_residues
MKFWFTLLQSLPELSTMDVELLDSKIDAQALRLDPHPTSPASATLTPAQLPVSGALIFPGIIVTLIVLFLMSIWAYTRVY
VITPNNEAFVRTGGVIRKKKTVILNGGCIVLPGFHELTRVPLREISIDVERTGNLAVRTQDYLRANMRVTFYVCINANEE
DVLVAAARLSKQGRISEADIKEALEKRADDAIRAAAKRKSIAEIDSDKLGFADEVLNLIQQDLKKVGLTLNNIAISEIEE
SDTYDENNFFDAQGVRLRTETIQKSIKQKLDVELTVLKEKRELELNTKVEIEEQELAAEQKSLKLAKAKEEAKLNQAKEI
EFLKAQQAQEIQASQDQELAKIERNRILQEKAVEEEKIQQKLSIQQNQIAADISLEQQNKALKIAMAEAEEEAKIAQQQA
AIAIANKEKERLAAEAERTRAEEAVATSKAVEQANREQRLAIIDAEKEADQKRIADQNVVEIDVFRRRRQAEIARQAAEL
EAESIRTLADANRYQALAEAQGKQALIEAENALSNANRTAELMKLFLPTLADQLPDIMKSLAPQPGVLGDAKVFAFPGTN
GDGAGLGEINKLLLSTSGLSLVNGLLEDGKLGTLLAQVKGLLQDNDADTSNNEVLQNVETLLAELKEKKTTTTSSETSPL
PTTFVPLPKEAKDSEGA

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yuaG and E.coli yqiK [H]

Homologues:

Organism=Escherichia coli, GI1789430, Length=523, Percent_Identity=29.2543021032505, Blast_Score=162, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 72509; Mature: 72509

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFWFTLLQSLPELSTMDVELLDSKIDAQALRLDPHPTSPASATLTPAQLPVSGALIFPG
CHHHHHHHHHCCCCCCCHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
IIVTLIVLFLMSIWAYTRVYVITPNNEAFVRTGGVIRKKKTVILNGGCIVLPGFHELTRV
HHHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCEEEECCEEEEECCEEEECCHHHHHHC
PLREISIDVERTGNLAVRTQDYLRANMRVTFYVCINANEEDVLVAAARLSKQGRISEADI
CHHHHEEEEECCCCEEEEEHHHHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHH
KEALEKRADDAIRAAAKRKSIAEIDSDKLGFADEVLNLIQQDLKKVGLTLNNIAISEIEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCEEHHHHHC
SDTYDENNFFDAQGVRLRTETIQKSIKQKLDVELTVLKEKRELELNTKVEIEEQELAAEQ
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCHHHCCCCCCEEECHHHHHHHH
KSLKLAKAKEEAKLNQAKEIEFLKAQQAQEIQASQDQELAKIERNRILQEKAVEEEKIQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSIQQNQIAADISLEQQNKALKIAMAEAEEEAKIAQQQAAIAIANKEKERLAAEAERTR
HHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
AEEAVATSKAVEQANREQRLAIIDAEKEADQKRIADQNVVEIDVFRRRRQAEIARQAAEL
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
EAESIRTLADANRYQALAEAQGKQALIEAENALSNANRTAELMKLFLPTLADQLPDIMKS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAPQPGVLGDAKVFAFPGTNGDGAGLGEINKLLLSTSGLSLVNGLLEDGKLGTLLAQVKG
HCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
LLQDNDADTSNNEVLQNVETLLAELKEKKTTTTSSETSPLPTTFVPLPKEAKDSEGA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKFWFTLLQSLPELSTMDVELLDSKIDAQALRLDPHPTSPASATLTPAQLPVSGALIFPG
CHHHHHHHHHCCCCCCCHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
IIVTLIVLFLMSIWAYTRVYVITPNNEAFVRTGGVIRKKKTVILNGGCIVLPGFHELTRV
HHHHHHHHHHHHHHHHCEEEEEECCCCEEEECCCEEEECCEEEEECCEEEECCHHHHHHC
PLREISIDVERTGNLAVRTQDYLRANMRVTFYVCINANEEDVLVAAARLSKQGRISEADI
CHHHHEEEEECCCCEEEEEHHHHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHH
KEALEKRADDAIRAAAKRKSIAEIDSDKLGFADEVLNLIQQDLKKVGLTLNNIAISEIEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCEEHHHHHC
SDTYDENNFFDAQGVRLRTETIQKSIKQKLDVELTVLKEKRELELNTKVEIEEQELAAEQ
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCHHHCCCCCCEEECHHHHHHHH
KSLKLAKAKEEAKLNQAKEIEFLKAQQAQEIQASQDQELAKIERNRILQEKAVEEEKIQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSIQQNQIAADISLEQQNKALKIAMAEAEEEAKIAQQQAAIAIANKEKERLAAEAERTR
HHHHHHHHHHHCCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHH
AEEAVATSKAVEQANREQRLAIIDAEKEADQKRIADQNVVEIDVFRRRRQAEIARQAAEL
HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
EAESIRTLADANRYQALAEAQGKQALIEAENALSNANRTAELMKLFLPTLADQLPDIMKS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAPQPGVLGDAKVFAFPGTNGDGAGLGEINKLLLSTSGLSLVNGLLEDGKLGTLLAQVKG
HCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
LLQDNDADTSNNEVLQNVETLLAELKEKKTTTTSSETSPLPTTFVPLPKEAKDSEGA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]