Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is hox1 [H]

Identifier: 170079103

GI number: 170079103

Start: 2615092

End: 2615814

Strand: Direct

Name: hox1 [H]

Synonym: SYNPCC7002_A2508

Alternate gene names: 170079103

Gene position: 2615092-2615814 (Clockwise)

Preceding gene: 170079102

Following gene: 170079106

Centisome position: 86.94

GC content: 49.65

Gene sequence:

>723_bases
ATGGTCGCTAACCTAGCAACAATGTTGAGAGAGGGAACGAAAACTTCCCACACGATGGCGGAAAACGTTGGCTTCGTGAA
ATGCTTCCTGAAGGGAGTCGTGGAGAAAAAATCCTACCGGAAGCTTGTGGCAGACCTTTACTATGTTTACTCAGCGATGG
AAGAGGAGATGGAGCGCCTCAAGGATCATCCCGTCGTCTCCCAAATTTATTTCCCTGAGTTAAACCGTAAACAAAGTCTC
GAAACGGATCTACGCTATTATTTTGGCCCCAATTGGCAAGCCGAAGCAAAAATTACTCCCGCTGGTCAGGCTTATGTGGA
TCGCATCCATGAAGTGGCCCAGACCGCACCGGAACTCTTAGTCAGCCATTCCTACACCCGCTACCTGGGCGATCTCTCTG
GGGGACAAATCCTCAAGAAAATTGCCCAAAATGCGATGAACCTCGACGGCGAAGGGACGGCCTTCTATGAGTTTGAGAAT
ATCTCTGATGAAAAGGCCTTTAAAGACAAGTACCGGGCGGCAATGAACAGCTTGGATGTGCCGGAAGAAACGGCAGAGCA
AATTGTCCAGGAAGCCAATGATGCCTTTGGCATGAATATGAATATGTTCAAGGAGCTAGAAGGAAACCTCGTTAAGGCCA
TCGGTGTGATGCTTTTCAATACCTTGACCCGTCGCCGCACCAAGGGCAGCACCGACGCTGATCTATCTCCGGCGAGCAAC
TAA

Upstream 100 bases:

>100_bases
GTTAACCTACGAAACTGAGCAGTCTTTTAATTTTGTTAACTTTCTTTAACAAACCTTTTAATATCTATTCATTTTCAGTA
AGAACAAGGGACTTATTTCT

Downstream 100 bases:

>100_bases
CAAGTTTCGTCTAAACCTCAAACAATGAATTCCTCAGTCGCGGTTGTGATTGGGGAATTTTTTTAGCTATGGGTTTTGGG
AAGCGGGAGGATTGTTCTCT

Product: heme oxygenase (decyclizing)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MVANLATMLREGTKTSHTMAENVGFVKCFLKGVVEKKSYRKLVADLYYVYSAMEEEMERLKDHPVVSQIYFPELNRKQSL
ETDLRYYFGPNWQAEAKITPAGQAYVDRIHEVAQTAPELLVSHSYTRYLGDLSGGQILKKIAQNAMNLDGEGTAFYEFEN
ISDEKAFKDKYRAAMNSLDVPEETAEQIVQEANDAFGMNMNMFKELEGNLVKAIGVMLFNTLTRRRTKGSTDADLSPASN

Sequences:

>Translated_240_residues
MVANLATMLREGTKTSHTMAENVGFVKCFLKGVVEKKSYRKLVADLYYVYSAMEEEMERLKDHPVVSQIYFPELNRKQSL
ETDLRYYFGPNWQAEAKITPAGQAYVDRIHEVAQTAPELLVSHSYTRYLGDLSGGQILKKIAQNAMNLDGEGTAFYEFEN
ISDEKAFKDKYRAAMNSLDVPEETAEQIVQEANDAFGMNMNMFKELEGNLVKAIGVMLFNTLTRRRTKGSTDADLSPASN
>Mature_240_residues
MVANLATMLREGTKTSHTMAENVGFVKCFLKGVVEKKSYRKLVADLYYVYSAMEEEMERLKDHPVVSQIYFPELNRKQSL
ETDLRYYFGPNWQAEAKITPAGQAYVDRIHEVAQTAPELLVSHSYTRYLGDLSGGQILKKIAQNAMNLDGEGTAFYEFEN
ISDEKAFKDKYRAAMNSLDVPEETAEQIVQEANDAFGMNMNMFKELEGNLVKAIGVMLFNTLTRRRTKGSTDADLSPASN

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI187761311, Length=209, Percent_Identity=53.5885167464115, Blast_Score=235, Evalue=3e-62,
Organism=Homo sapiens, GI187761309, Length=209, Percent_Identity=53.5885167464115, Blast_Score=235, Evalue=3e-62,
Organism=Homo sapiens, GI187761307, Length=209, Percent_Identity=53.5885167464115, Blast_Score=235, Evalue=3e-62,
Organism=Homo sapiens, GI8051608, Length=209, Percent_Identity=53.5885167464115, Blast_Score=235, Evalue=3e-62,
Organism=Homo sapiens, GI4504437, Length=210, Percent_Identity=50, Blast_Score=221, Evalue=4e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 27127; Mature: 27127

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANLATMLREGTKTSHTMAENVGFVKCFLKGVVEKKSYRKLVADLYYVYSAMEEEMERL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHPVVSQIYFPELNRKQSLETDLRYYFGPNWQAEAKITPAGQAYVDRIHEVAQTAPELL
HCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
VSHSYTRYLGDLSGGQILKKIAQNAMNLDGEGTAFYEFENISDEKAFKDKYRAAMNSLDV
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
PEETAEQIVQEANDAFGMNMNMFKELEGNLVKAIGVMLFNTLTRRRTKGSTDADLSPASN
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVANLATMLREGTKTSHTMAENVGFVKCFLKGVVEKKSYRKLVADLYYVYSAMEEEMERL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHPVVSQIYFPELNRKQSLETDLRYYFGPNWQAEAKITPAGQAYVDRIHEVAQTAPELL
HCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
VSHSYTRYLGDLSGGQILKKIAQNAMNLDGEGTAFYEFENISDEKAFKDKYRAAMNSLDV
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
PEETAEQIVQEANDAFGMNMNMFKELEGNLVKAIGVMLFNTLTRRRTKGSTDADLSPASN
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]