Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079087

Identifier: 170079087

GI number: 170079087

Start: 2597602

End: 2598126

Strand: Reverse

Name: 170079087

Synonym: SYNPCC7002_A2492

Alternate gene names: NA

Gene position: 2598126-2597602 (Counterclockwise)

Preceding gene: 170079088

Following gene: 170079085

Centisome position: 86.37

GC content: 47.24

Gene sequence:

>525_bases
ATGCCAATGAAAACGCCTCAAACTTTCTCTCTCCCTTGGTACCGCTGGCTCAATAGCCAATATGTTGTGCGGTTGTTAGA
AACGGTTCAAGATCTGATTGTGATTGGCCTGTGTGTTGGGCTGTTTAGCTTTATGGTGTTGCAACTGCGGGAGATGGTGC
TTTCGTTGTTGCCGCCTCTGCAATTTCAGACGGTTACTTCTGATATTCTCTTTTTACTGATTTTGGTAGAGCTGTTTCGT
TTGCTGATTATCTACCTCCAAGAACACCGGGTTTCTATCGGTGTGGCGGTGGAAGTGTCGATTGTTTCTGTGCTCCGGGA
AATTATTGTACGCGGTGTTTTAGAAACGCCTTGGACACAGGTTTTGGTTGCTTGTATTTTTCTGTTGGTTTTAGGGGCGC
TGTTGGTGATTCGCGTTTGGTTGCCACCGACCTTTGACGGGATTGATCCGGAGCAAGTCGTCTCACAGCGGCACCGTTCT
CGGCGTCATCCCCAAGAAAAAGAGAATCATACGTTGATTTCCTAG

Upstream 100 bases:

>100_bases
ATGGTCAAGCTGAAACCAATCAGAGCGTATTCCACCTTATTTCGCTGCACGGCCCAAGCGACGCGGGTTCATCCAGCAAC
GTAGTTTTTAAATTAATTTA

Downstream 100 bases:

>100_bases
GGAAGTATTTTATCGGCAGCACCGGGTTTAAGTAATAGATGACTCGGTGCGATCGCCTTTAATTTGTAGAGCCCAATTGC
GGGTCAAGATCATCCGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFR
LLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRS
RRHPQEKENHTLIS

Sequences:

>Translated_174_residues
MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFR
LLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRS
RRHPQEKENHTLIS
>Mature_173_residues
PMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPLQFQTVTSDILFLLILVELFRL
LIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQVLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSR
RHPQEKENHTLIS

Specific function: Unknown

COG id: COG3431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20095; Mature: 19964

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QFQTVTSDILFLLILVELFRLLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSRRHPQEKENHTLIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PMKTPQTFSLPWYRWLNSQYVVRLLETVQDLIVIGLCVGLFSFMVLQLREMVLSLLPPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QFQTVTSDILFLLILVELFRLLIIYLQEHRVSIGVAVEVSIVSVLREIIVRGVLETPWTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VLVACIFLLVLGALLVIRVWLPPTFDGIDPEQVVSQRHRSRRHPQEKENHTLIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA