| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is argH [H]
Identifier: 170079082
GI number: 170079082
Start: 2588869
End: 2590260
Strand: Reverse
Name: argH [H]
Synonym: SYNPCC7002_A2487
Alternate gene names: 170079082
Gene position: 2590260-2588869 (Counterclockwise)
Preceding gene: 170079085
Following gene: 170079075
Centisome position: 86.11
GC content: 49.93
Gene sequence:
>1392_bases ATGACAGAAGCTAAAAAAACCTGGAGCGATCGCTTTGATACATCGCTACATCCGGCGATCGCCGTGTTTAATGCCAGTAT CGGCTTTGATATTGAACTGATCGAGTATGACATTACGGGTTCAGTGGCCCATGCCCAGATGCTCGCCCACACTGGGATTA TTTCCGCCGAAGAAGGTAAAATCCTCGTCCAAGGTTTAGAACAAGTCCGCCAGGAATATCGCAAGGGCAACTTTCACCCC GGCGTCGAAGATGAGGATGTCCATTTCGCAGTCGAAAAACGCTTGACGGCAATTGTTGGCGATGTGGGCAAAAAACTCCA CACCGGGCGATCGCGCAATGATCAGGTAGGCACGGATATTCGTCTCTATCTGCGGGACAAAATTCGCGGCATTCAGCAGC AATTGCGAGACTTTCAACAGGTTTTATTGAATCACGCGGAAAACCATGTGGAGACTTTGATTCCCGGCTATACCCACCTG CAACGGGCGCAACCAATTAGCCTCGCCCATCACTTGATGGCCTATTTCCAGATGGCCCAACGGGATTATGAACGGTTGGA TGATGTCTACAAGCGCACCAATACTTCTCCCCTTGGTTGTGGCGCTTTGGCGGGGACAACTTTTCCCATTGATCGCCATT TCAGCGCGAATTTACTCGGCTTTGAACGCCTCTATCAAAACAGTCTCGATGGGGTCAGCGATCGCGATTTTGCCATCGAG TTTTCCGCCGCTGCCAGCTTGATCATGGTGCACCTGAGCCGCTTGTCTGAAGAGATGATTTTCTGGGCCTCGAAGGAATT TAGTTTTATTAGCTTAAAAGATAGTTGTGCGACGGGTTCGAGCATTATGCCCCAGAAGAAAAACCCGGATATTCCGGAAT TGGTGCGCGGCAAAACAGGTCGCGTGTTTGGACATCTCCAAGGGTTACTCGTGCTGATGAAAGGCTTACCCCTCGCCTAT AATAAGGATTTGCAAGACGATAAAGAGGGCCTTTTTGATACCGTTAAAACAGTGCAGGGTTGCCTCGAAGCGATGACCAT TTTGCTCGGTGAGGGGATTGAATTCCGCACCCAACGCCTTGAGGAAGCAGTAAACGAAGACTTTTCTAACGCGACCGATG TGGCTGATTATTTAGCGAGTAAAGGGGTGCCGTTCCGGGAAGCCTATAACCTCGTGGGCAAAGTAGTGAAAACCAGTCTT GCCGCTGACAAATTGCTCAAGGATTTGACGATGGACGAATGGAAAGCATTACATCCTGCCTTTGAAGAAGATATCTATCA GGCGATCGCCCCCCAGCAAGTCGTGGCAGCCCGTAATAGTTATGGAGGCACAGGTTTTGAACAGGTACGGCAGGCGATCG CTGAAGCCCAAAATCTTCTGACCAATCCCTAG
Upstream 100 bases:
>100_bases CTCACCGCTTTGGGGAAGATCGGCGTTTAGGGGAATGGCTTGATGCCGTAAGATTTACCGAGAGAATTGATTGTGATTTC CTGCGAGGGCTAGTGCCGTT
Downstream 100 bases:
>100_bases CATTTCGCTGGAGGGGGTATCGAGAAGATACTTTCTTTGTAATGGATAGTGGCGATCGTTATTGCACTAATGATTTGTTA GCGAGCTATAGTGTTTCCTC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTEAKKTWSDRFDTSLHPAIAVFNASIGFDIELIEYDITGSVAHAQMLAHTGIISAEEGKILVQGLEQVRQEYRKGNFHP GVEDEDVHFAVEKRLTAIVGDVGKKLHTGRSRNDQVGTDIRLYLRDKIRGIQQQLRDFQQVLLNHAENHVETLIPGYTHL QRAQPISLAHHLMAYFQMAQRDYERLDDVYKRTNTSPLGCGALAGTTFPIDRHFSANLLGFERLYQNSLDGVSDRDFAIE FSAAASLIMVHLSRLSEEMIFWASKEFSFISLKDSCATGSSIMPQKKNPDIPELVRGKTGRVFGHLQGLLVLMKGLPLAY NKDLQDDKEGLFDTVKTVQGCLEAMTILLGEGIEFRTQRLEEAVNEDFSNATDVADYLASKGVPFREAYNLVGKVVKTSL AADKLLKDLTMDEWKALHPAFEEDIYQAIAPQQVVAARNSYGGTGFEQVRQAIAEAQNLLTNP
Sequences:
>Translated_463_residues MTEAKKTWSDRFDTSLHPAIAVFNASIGFDIELIEYDITGSVAHAQMLAHTGIISAEEGKILVQGLEQVRQEYRKGNFHP GVEDEDVHFAVEKRLTAIVGDVGKKLHTGRSRNDQVGTDIRLYLRDKIRGIQQQLRDFQQVLLNHAENHVETLIPGYTHL QRAQPISLAHHLMAYFQMAQRDYERLDDVYKRTNTSPLGCGALAGTTFPIDRHFSANLLGFERLYQNSLDGVSDRDFAIE FSAAASLIMVHLSRLSEEMIFWASKEFSFISLKDSCATGSSIMPQKKNPDIPELVRGKTGRVFGHLQGLLVLMKGLPLAY NKDLQDDKEGLFDTVKTVQGCLEAMTILLGEGIEFRTQRLEEAVNEDFSNATDVADYLASKGVPFREAYNLVGKVVKTSL AADKLLKDLTMDEWKALHPAFEEDIYQAIAPQQVVAARNSYGGTGFEQVRQAIAEAQNLLTNP >Mature_462_residues TEAKKTWSDRFDTSLHPAIAVFNASIGFDIELIEYDITGSVAHAQMLAHTGIISAEEGKILVQGLEQVRQEYRKGNFHPG VEDEDVHFAVEKRLTAIVGDVGKKLHTGRSRNDQVGTDIRLYLRDKIRGIQQQLRDFQQVLLNHAENHVETLIPGYTHLQ RAQPISLAHHLMAYFQMAQRDYERLDDVYKRTNTSPLGCGALAGTTFPIDRHFSANLLGFERLYQNSLDGVSDRDFAIEF SAAASLIMVHLSRLSEEMIFWASKEFSFISLKDSCATGSSIMPQKKNPDIPELVRGKTGRVFGHLQGLLVLMKGLPLAYN KDLQDDKEGLFDTVKTVQGCLEAMTILLGEGIEFRTQRLEEAVNEDFSNATDVADYLASKGVPFREAYNLVGKVVKTSLA ADKLLKDLTMDEWKALHPAFEEDIYQAIAPQQVVAARNSYGGTGFEQVRQAIAEAQNLLTNP
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=459, Percent_Identity=40.958605664488, Blast_Score=358, Evalue=5e-99, Organism=Homo sapiens, GI68303542, Length=459, Percent_Identity=40.958605664488, Blast_Score=358, Evalue=5e-99, Organism=Homo sapiens, GI68303549, Length=459, Percent_Identity=38.3442265795207, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI68303547, Length=459, Percent_Identity=38.1263616557734, Blast_Score=320, Evalue=1e-87, Organism=Escherichia coli, GI1790398, Length=454, Percent_Identity=46.4757709251101, Blast_Score=410, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6321806, Length=449, Percent_Identity=41.4253897550111, Blast_Score=349, Evalue=6e-97, Organism=Drosophila melanogaster, GI221473854, Length=449, Percent_Identity=39.6436525612472, Blast_Score=322, Evalue=3e-88, Organism=Drosophila melanogaster, GI78706858, Length=449, Percent_Identity=39.6436525612472, Blast_Score=322, Evalue=3e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 51746; Mature: 51615
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAKKTWSDRFDTSLHPAIAVFNASIGFDIELIEYDITGSVAHAQMLAHTGIISAEEGK CCCCHHHHHHHCCCCCCHHHHHEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCH ILVQGLEQVRQEYRKGNFHPGVEDEDVHFAVEKRLTAIVGDVGKKLHTGRSRNDQVGTDI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH RLYLRDKIRGIQQQLRDFQQVLLNHAENHVETLIPGYTHLQRAQPISLAHHLMAYFQMAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH RDYERLDDVYKRTNTSPLGCGALAGTTFPIDRHFSANLLGFERLYQNSLDGVSDRDFAIE HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE FSAAASLIMVHLSRLSEEMIFWASKEFSFISLKDSCATGSSIMPQKKNPDIPELVRGKTG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCC RVFGHLQGLLVLMKGLPLAYNKDLQDDKEGLFDTVKTVQGCLEAMTILLGEGIEFRTQRL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EEAVNEDFSNATDVADYLASKGVPFREAYNLVGKVVKTSLAADKLLKDLTMDEWKALHPA HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHH FEEDIYQAIAPQQVVAARNSYGGTGFEQVRQAIAEAQNLLTNP HHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEAKKTWSDRFDTSLHPAIAVFNASIGFDIELIEYDITGSVAHAQMLAHTGIISAEEGK CCCHHHHHHHCCCCCCHHHHHEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCH ILVQGLEQVRQEYRKGNFHPGVEDEDVHFAVEKRLTAIVGDVGKKLHTGRSRNDQVGTDI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH RLYLRDKIRGIQQQLRDFQQVLLNHAENHVETLIPGYTHLQRAQPISLAHHLMAYFQMAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH RDYERLDDVYKRTNTSPLGCGALAGTTFPIDRHFSANLLGFERLYQNSLDGVSDRDFAIE HHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE FSAAASLIMVHLSRLSEEMIFWASKEFSFISLKDSCATGSSIMPQKKNPDIPELVRGKTG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCC RVFGHLQGLLVLMKGLPLAYNKDLQDDKEGLFDTVKTVQGCLEAMTILLGEGIEFRTQRL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EEAVNEDFSNATDVADYLASKGVPFREAYNLVGKVVKTSLAADKLLKDLTMDEWKALHPA HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHH FEEDIYQAIAPQQVVAARNSYGGTGFEQVRQAIAEAQNLLTNP HHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA