Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079078

Identifier: 170079078

GI number: 170079078

Start: 2586131

End: 2587498

Strand: Direct

Name: 170079078

Synonym: SYNPCC7002_A2483

Alternate gene names: NA

Gene position: 2586131-2587498 (Clockwise)

Preceding gene: 170079077

Following gene: 170079079

Centisome position: 85.97

GC content: 47.81

Gene sequence:

>1368_bases
ATGTGCGAGCATGTGCCGGAGGGGGAATATTATGTGTACCAGGGCGGCAGCCATGCAGATGGGACATTTATTCGCGTGTA
TGTCCCAGAGTCCGCCTCAAATCCTGGCACAAAGCTGAATGTCATTCTTTATCTCCATGGGTTTGCCCTCTGTATGCCTT
CTTTTTATGAGGCCCATCTGCTTGAGTTGGTAAAGCAAGGATACATTGTCTTTTTTCCTGATTTTCAGCGGAGTTTTTAT
CCGAATACAGCACCCCAAACGCCAACGCCACCCCGACAATCTCAGCCCCATATTCAGCAATGGCTAGCGGCTGCGACGCA
AACTCAGAAGTCAGCCCAGAAGACCTTAGCAACAGAAGATATTCACCCTCTATTTTCAGAAATTTACGAACGGAATGATA
CGGGTTTAAGCCGTGGCCTATCTGCCTTTACGATGGGAGACTTGCGCCGCGTGGCCTGGGCTTTGGTCGTGATTATTTTG
CTGCTGACTGTGTGTAGCTGGTTTCGGCGGGAGTATGGGAAAAATTTGATTCATCTTTTGTCTACGGTAGGTTTGAGCCT
AGTGCATTCACCAACGGAATGGCTGAGTAATGCGATCGCCCTCCCGGAAGATGCTTGGGAATATTTAACGACCCAGGAAC
GCTATGCCCACTGGAATCAGGAAAGCTTAGAGACCTTTGCCTTTGGTCATTCTTTGGGTGGATTAATTGCCTTGAGTCTC
CCCTCTGTGCTGAAAGATTCGCCTAGCAATCGCTTTTTCCCGAAGCAAATCGTCACAGCCGATCCCGCTGCCAGTACGGA
AATGGGCATCCCCAAAATTGCGATTTGGATCTTGAAGTTGTTCCGGTCTCCTTTCACGGCAGCCCCGATTTTGATTCAGG
ATACGGGGCCAGATCTAAAGCAGCCCGTAGCAATCTTACATGGTGGTTCTGATACCTTGGTGCCGCCCAGTCAATGGGTT
GATCCGATGCGGGGACAAGCTACTTCTAATTATGAGGCGATCGCCAGTGAAAATAAGGCGATTTATTTTTCCTATTCCAA
TCCAGAAAACGAGCCGCCCCTGGTCGCTTTTCATAATCAAGCGGTGACTTCGACGCAATATTATGACGATGCTTTATTTA
AGGATTTTGGCGGCGTTAAAGATGGCCCAAATGCCTACAATACCGATTATGTTTGGCCTGGGGTCACAAAGATTTTCCAG
AATATTGCCACGCCGGAAAATCTACTTTCACATCTTAATACACCAAAATTTCAAGTAGAACCGACTCCCCCGGTGAAGCC
TGCTTCAAATTGGACAAAATTTGCGTGGATTGCTGGGATTGTTCTAGTTCTTGGCGTTGGCTTTTGGCTTTGGAAAACAG
TTGGATAA

Upstream 100 bases:

>100_bases
TAAAAGTATGACCAGTGCCAAAACACTATATAAATCTGCGTTTACACCATTTCATTAGGGGGATCTACAAGCTATGTCAC
TGGCGGCTTCTGAATCTTGG

Downstream 100 bases:

>100_bases
GTTTTTAGACATTCAGCAAATCAAGGCAGCAATCATCTGTTGAGGGGCGATCGCCAGATCGAAATCTCCGACAAAGCACC
GAGCATTACCTTGGTCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY
PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL
LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL
PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV
DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ
NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG

Sequences:

>Translated_455_residues
MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY
PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL
LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL
PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV
DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ
NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG
>Mature_455_residues
MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY
PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL
LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL
PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV
DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ
NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50780; Mature: 50780

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHL
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH
LELVKQGYIVFFPDFQRSFYPNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATED
HHHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIILLLTVCSWFRREYGKNLIHLL
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL
HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLK
HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHH
QPVAILHGGSDTLVPPSQWVDPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQ
CCEEEEECCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCC
AVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQNIATPENLLSHLNTPKFQVE
HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEEC
PTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHL
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH
LELVKQGYIVFFPDFQRSFYPNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATED
HHHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIILLLTVCSWFRREYGKNLIHLL
HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL
HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLK
HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHH
QPVAILHGGSDTLVPPSQWVDPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQ
CCEEEEECCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCC
AVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQNIATPENLLSHLNTPKFQVE
HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEEC
PTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA