| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079078
Identifier: 170079078
GI number: 170079078
Start: 2586131
End: 2587498
Strand: Direct
Name: 170079078
Synonym: SYNPCC7002_A2483
Alternate gene names: NA
Gene position: 2586131-2587498 (Clockwise)
Preceding gene: 170079077
Following gene: 170079079
Centisome position: 85.97
GC content: 47.81
Gene sequence:
>1368_bases ATGTGCGAGCATGTGCCGGAGGGGGAATATTATGTGTACCAGGGCGGCAGCCATGCAGATGGGACATTTATTCGCGTGTA TGTCCCAGAGTCCGCCTCAAATCCTGGCACAAAGCTGAATGTCATTCTTTATCTCCATGGGTTTGCCCTCTGTATGCCTT CTTTTTATGAGGCCCATCTGCTTGAGTTGGTAAAGCAAGGATACATTGTCTTTTTTCCTGATTTTCAGCGGAGTTTTTAT CCGAATACAGCACCCCAAACGCCAACGCCACCCCGACAATCTCAGCCCCATATTCAGCAATGGCTAGCGGCTGCGACGCA AACTCAGAAGTCAGCCCAGAAGACCTTAGCAACAGAAGATATTCACCCTCTATTTTCAGAAATTTACGAACGGAATGATA CGGGTTTAAGCCGTGGCCTATCTGCCTTTACGATGGGAGACTTGCGCCGCGTGGCCTGGGCTTTGGTCGTGATTATTTTG CTGCTGACTGTGTGTAGCTGGTTTCGGCGGGAGTATGGGAAAAATTTGATTCATCTTTTGTCTACGGTAGGTTTGAGCCT AGTGCATTCACCAACGGAATGGCTGAGTAATGCGATCGCCCTCCCGGAAGATGCTTGGGAATATTTAACGACCCAGGAAC GCTATGCCCACTGGAATCAGGAAAGCTTAGAGACCTTTGCCTTTGGTCATTCTTTGGGTGGATTAATTGCCTTGAGTCTC CCCTCTGTGCTGAAAGATTCGCCTAGCAATCGCTTTTTCCCGAAGCAAATCGTCACAGCCGATCCCGCTGCCAGTACGGA AATGGGCATCCCCAAAATTGCGATTTGGATCTTGAAGTTGTTCCGGTCTCCTTTCACGGCAGCCCCGATTTTGATTCAGG ATACGGGGCCAGATCTAAAGCAGCCCGTAGCAATCTTACATGGTGGTTCTGATACCTTGGTGCCGCCCAGTCAATGGGTT GATCCGATGCGGGGACAAGCTACTTCTAATTATGAGGCGATCGCCAGTGAAAATAAGGCGATTTATTTTTCCTATTCCAA TCCAGAAAACGAGCCGCCCCTGGTCGCTTTTCATAATCAAGCGGTGACTTCGACGCAATATTATGACGATGCTTTATTTA AGGATTTTGGCGGCGTTAAAGATGGCCCAAATGCCTACAATACCGATTATGTTTGGCCTGGGGTCACAAAGATTTTCCAG AATATTGCCACGCCGGAAAATCTACTTTCACATCTTAATACACCAAAATTTCAAGTAGAACCGACTCCCCCGGTGAAGCC TGCTTCAAATTGGACAAAATTTGCGTGGATTGCTGGGATTGTTCTAGTTCTTGGCGTTGGCTTTTGGCTTTGGAAAACAG TTGGATAA
Upstream 100 bases:
>100_bases TAAAAGTATGACCAGTGCCAAAACACTATATAAATCTGCGTTTACACCATTTCATTAGGGGGATCTACAAGCTATGTCAC TGGCGGCTTCTGAATCTTGG
Downstream 100 bases:
>100_bases GTTTTTAGACATTCAGCAAATCAAGGCAGCAATCATCTGTTGAGGGGCGATCGCCAGATCGAAATCTCCGACAAAGCACC GAGCATTACCTTGGTCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG
Sequences:
>Translated_455_residues MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG >Mature_455_residues MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHLLELVKQGYIVFFPDFQRSFY PNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATEDIHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIIL LLTVCSWFRREYGKNLIHLLSTVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLKQPVAILHGGSDTLVPPSQWV DPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQAVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQ NIATPENLLSHLNTPKFQVEPTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50780; Mature: 50780
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHL CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH LELVKQGYIVFFPDFQRSFYPNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATED HHHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIILLLTVCSWFRREYGKNLIHLL HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLK HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHH QPVAILHGGSDTLVPPSQWVDPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQ CCEEEEECCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCC AVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQNIATPENLLSHLNTPKFQVE HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEEC PTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCEHVPEGEYYVYQGGSHADGTFIRVYVPESASNPGTKLNVILYLHGFALCMPSFYEAHL CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH LELVKQGYIVFFPDFQRSFYPNTAPQTPTPPRQSQPHIQQWLAAATQTQKSAQKTLATED HHHHHCCCEEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IHPLFSEIYERNDTGLSRGLSAFTMGDLRRVAWALVVIILLLTVCSWFRREYGKNLIHLL HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVGLSLVHSPTEWLSNAIALPEDAWEYLTTQERYAHWNQESLETFAFGHSLGGLIALSL HHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH PSVLKDSPSNRFFPKQIVTADPAASTEMGIPKIAIWILKLFRSPFTAAPILIQDTGPDLK HHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHH QPVAILHGGSDTLVPPSQWVDPMRGQATSNYEAIASENKAIYFSYSNPENEPPLVAFHNQ CCEEEEECCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCC AVTSTQYYDDALFKDFGGVKDGPNAYNTDYVWPGVTKIFQNIATPENLLSHLNTPKFQVE HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCCEEEC PTPPVKPASNWTKFAWIAGIVLVLGVGFWLWKTVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA