| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cdsA [H]
Identifier: 170079074
GI number: 170079074
Start: 2583681
End: 2584559
Strand: Direct
Name: cdsA [H]
Synonym: SYNPCC7002_A2479
Alternate gene names: 170079074
Gene position: 2583681-2584559 (Clockwise)
Preceding gene: 170079073
Following gene: 170079076
Centisome position: 85.89
GC content: 52.45
Gene sequence:
>879_bases ATGTCTTTGTCGCGAATCATTAGTGGTGTAGTGGCGATCGCCCTGGCCTTGACCCTCATTGTCTTGGGGGGATGGTACTT TACCTTGGGAATGGGCATCCTCGTCTTTCTCGGCCAACAAGAATACTTCCGGATGGTTCGGGCAAAGGGATTAGCACCAG CGGTAAAAACCACCCTAGTCGTGTCTCAATTGTTGCTTGTGATTGCGACCTTGAGTCCGAGCCTTGCTGACGCCCTCTTT CCCCTCGCCGGGACGTTTATCTGCTTTTATCTTCTATTCCAGCCCAAAATGGCAACTATTGCCGATCTCTCCACCTCAAT TTTGGGACTCTTTTACGGCGGTTATATGCCCAGCTACTGGGTACGACTGAGGATGGGCAGCCTCGCAGAAACGGAAGCCG TGAGTAACTTACCCTTCTATGGCTATCTTCCGGCTTCCTGGGGAGAGTGGTTTAATTTGCCCCAGGCCCTCAAGTTGACC TTTGTCGTGATGGTTTGTATTTGGGCCGCCGACATTGGGGCTTACTTCATGGGCAAATGGCTAGGGAAAACGAAGCTCTC GGCCATTAGCCCCAAAAAGACCGTCGAAGGGGCTGTATTTGGAGCCTTAGGGACTATCTTCGTGGCGATCGCCGGGGCTT GGTATCTCGATTGGTCATGGTGGCCCATCACGGGAACACTTTTGGGGCTGCTCATCAGCGTCACCACCCTACTCGGAGAC CTAACCGAATCAATCATGAAACGGGATGCGGGCTTTAAGGATTCTGGACAGTTGATTCCGGGCCACGGCGGAATCCTCGA CCGCACTGATAGCTATGTTTTTACTGCGCCAGTCGTTTATCTATTTGTGACCATTGTCCTGCCGATCTTCGGCTCCTAA
Upstream 100 bases:
>100_bases CCGTGAATCTTGTTAACGTTTGATAAAATTTTCTTTAACAACCCTGGGGAACCCGCTTTAATTCTTTTATTGAAGCCCCC AGCCGTGAGCTTGCAGTTTT
Downstream 100 bases:
>100_bases ACAGCACCTCTTAAAAAGTATGGGTCATCAAGCAAAAGAGATCTCCACCCATTCGGGAGATCCGTGGCAGTCAGTCCGAA AATTGAAGAGAAATTCAAAA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALF PLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLT FVVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS
Sequences:
>Translated_292_residues MSLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALF PLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLT FVVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS >Mature_291_residues SLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLVVSQLLLVIATLSPSLADALFP LAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYWVRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLTF VVMVCIWAADIGAYFMGKWLGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGDL TESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=131, Percent_Identity=45.8015267175573, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=44.0677966101695, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31716; Mature: 31585
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH VSQLLLVIATLSPSLADALFPLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH VRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLTFVVMVCIWAADIGAYFMGKW HHHHHCCHHHHHHHHCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLSRIISGVVAIALALTLIVLGGWYFTLGMGILVFLGQQEYFRMVRAKGLAPAVKTTLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH VSQLLLVIATLSPSLADALFPLAGTFICFYLLFQPKMATIADLSTSILGLFYGGYMPSYW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH VRLRMGSLAETEAVSNLPFYGYLPASWGEWFNLPQALKLTFVVMVCIWAADIGAYFMGKW HHHHHCCHHHHHHHHCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGKTKLSAISPKKTVEGAVFGALGTIFVAIAGAWYLDWSWWPITGTLLGLLISVTTLLGD HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTESIMKRDAGFKDSGQLIPGHGGILDRTDSYVFTAPVVYLFVTIVLPIFGS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]