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The map label for this gene is scpB

Identifier: 170079068

GI number: 170079068

Start: 2577051

End: 2577545

Strand: Direct

Name: scpB

Synonym: SYNPCC7002_A2473

Alternate gene names: NA

Gene position: 2577051-2577545 (Clockwise)

Preceding gene: 170079067

Following gene: 170079069

Centisome position: 85.67

GC content: 52.32

Gene sequence:

>495_bases
ATGAAGCTTGCGACGACCCTAGAGGCAATTCTCTACATCAAAGCCCAACCCCTGAGCCTGGAAGAATTGGCCGATACCGC
TGGACAACCCCGGCACCTGGTGGCCGATGCTCTTTTGGAATTGATGGATGATTATGCCCACCGGGACAGCGCCCTTGAAG
TGGTAGAAACCCCCACCGGATTTAGCCTGCAACTGCGGGAAAGCTTTCAAGCCCTCGTGACGAATCTTATCCCCACAGAG
TTAAGCATTGGTGCCCAAAGAACCCTGGCGGCGATCGCCTTAAAATCACCAATTCTACAAACGGAACTGATCGAATTGCG
GGGTAGTGGTGCCTACCAACATATCCAGGATCTTTTGGCCCAGGGCTTTATTAAACGGCGACGGCAGCAAGAGGGGCGCT
CCTATTGGCTCGAAGTGAGCGCGAAATTTCACCAATACTTTGAATTTGATGCTGAGGATCTAGGGCTATCCCCCAACCTT
CCAGAAACCCCTTAA

Upstream 100 bases:

>100_bases
TAAAATTCAGCCGCCGCCTCAACAGCTCGAACTCTTGCCGGAGCAGAAATAAAGCCGATACAGTGGGAGGCTAAACCCCA
CCCCGTTTGGTCTGCCCCCC

Downstream 100 bases:

>100_bases
TCTCCCCTTAAAACCGCGATCCATTGTCAAGAAATGTCACCCCGTCTGATACCCTACAGACAAACTATTTTCTTCGTTTG
CGATCGCCATGCGTATAGCT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: Segregation And Condensation Protein B; Condensin Subunit ScpB; Transcriptional Regulator; Transcription Regulator; YpuH-Like Family Transcriptional Regulator; Chromosome Segregation/Condensation Protein B; Transcription Regulator YpuH-Like Family; Transcriptional Regulator Containing HTH Domain

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKLATTLEAILYIKAQPLSLEELADTAGQPRHLVADALLELMDDYAHRDSALEVVETPTGFSLQLRESFQALVTNLIPTE
LSIGAQRTLAAIALKSPILQTELIELRGSGAYQHIQDLLAQGFIKRRRQQEGRSYWLEVSAKFHQYFEFDAEDLGLSPNL
PETP

Sequences:

>Translated_164_residues
MKLATTLEAILYIKAQPLSLEELADTAGQPRHLVADALLELMDDYAHRDSALEVVETPTGFSLQLRESFQALVTNLIPTE
LSIGAQRTLAAIALKSPILQTELIELRGSGAYQHIQDLLAQGFIKRRRQQEGRSYWLEVSAKFHQYFEFDAEDLGLSPNL
PETP
>Mature_164_residues
MKLATTLEAILYIKAQPLSLEELADTAGQPRHLVADALLELMDDYAHRDSALEVVETPTGFSLQLRESFQALVTNLIPTE
LSIGAQRTLAAIALKSPILQTELIELRGSGAYQHIQDLLAQGFIKRRRQQEGRSYWLEVSAKFHQYFEFDAEDLGLSPNL
PETP

Specific function: Unknown

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18348; Mature: 18348

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLATTLEAILYIKAQPLSLEELADTAGQPRHLVADALLELMDDYAHRDSALEVVETPTG
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
FSLQLRESFQALVTNLIPTELSIGAQRTLAAIALKSPILQTELIELRGSGAYQHIQDLLA
CCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
QGFIKRRRQQEGRSYWLEVSAKFHQYFEFDAEDLGLSPNLPETP
HHHHHHHHHHHCHHEEHHHHHHHHHHHHCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MKLATTLEAILYIKAQPLSLEELADTAGQPRHLVADALLELMDDYAHRDSALEVVETPTG
CCHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
FSLQLRESFQALVTNLIPTELSIGAQRTLAAIALKSPILQTELIELRGSGAYQHIQDLLA
CCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
QGFIKRRRQQEGRSYWLEVSAKFHQYFEFDAEDLGLSPNLPETP
HHHHHHHHHHHCHHEEHHHHHHHHHHHHCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA