Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yyaL [H]

Identifier: 170079059

GI number: 170079059

Start: 2564210

End: 2566252

Strand: Reverse

Name: yyaL [H]

Synonym: SYNPCC7002_A2464

Alternate gene names: 170079059

Gene position: 2566252-2564210 (Counterclockwise)

Preceding gene: 170079064

Following gene: 170079058

Centisome position: 85.31

GC content: 49.88

Gene sequence:

>2043_bases
ATGGCGAATCGCTTGGCCGACACCAAAAGTCTCTATCTTCGCAAACACGCGGATAATCCCATCGACTGGTGGTATTGGTG
TGATGAGGCTTTGGCCCAGGCAAAGGCAGAAAATAAGCCCATTTTTCTCTCCATTGGTTATTCTTCCTGCCATTGGTGCA
CTGTGATGGAAGGGGAAGCGTTTTCTGATCCAGAAATTGCCACCTATTTAAACGAAAATTTTTTACCCATCAAAGTGGAT
CGCGAGGAACGGCCAGACATCGACAGCATCTATATGCAAGCGTTGCAACTGATGACAGGGCAAGGGGGCTGGCCACTGAA
TATTTTTCTGACGCCGGCTGATTTGATGCCATTTTATGGGGGTACCTATTTTCCTGTTTCTCCCCGGTATAATCGCCCTG
GATTTTTGGATGTGCTGATGTCTCTGCGACGGTTCTTTGATGAGGAGCCGGAGAAACTCCAGGAGATTAAAACTGAAATT
TTCACAATTTTAGACCGTTCTGCTCAACTGCCCCAGGGCCAAGCGCCCCTCGATCAAAATCTGTTTCTCAAAGGCCTAGA
GCCTTGTACTGCCATTGTGGGCCGGGGTGATGCGGGGCCAAGTTTTCCGATGATCCCCTACGGGGCGATCGCCTTACAGG
GAAGTCGTTTTACCTCGAATGCGCGCCACAACGGTTTGTTAGTGAGTACCAAACGGGGTTTAGACCTTGCCCTGGGGGGA
ATTTATGACCATGTGGGGGGCGGCTTCCATCGCTATACCGTCGATCCCCATTGGACAGTGCCCCATTTTGAAAAAATGCT
CTATGACAACGGGCAAATCACCGAGTTTCTCGCCAATCTGTGGGCTGAGGGGGTGACGGAGCCGGCCTTTAAAACGGCCC
TAGAGGGAACCGTCGCTTGGCTCGCCCGGGAAATGACAGCCCCCCAAGGCTATTTTTATGCAGCCCAGGATGCCGATAGT
TTTCTCGATGCCGGGCACCCAGAACCAGAAGAAGGCGCTTTCTATGTCTGGGATTACGACGAACTCCAGACGCAACTCAC
GGCGGCACAATTTGCTGAATTGGAACAGGCATTTTTTATTGCGCCGGACGGTAATTTTGAGGGAAAAATTGTTTTAAAAC
GACGGCAATCCACAGAAATTTCGGAGAGCTTGCAAGGCATTCTTGATCAATTATTTACAGAGCGCTACGGTACGCCCCGG
CAGGCCCTCGATCAGTTTCCCCCTGCCCGCGATAACACCGAAGCAAAGGCAACAGCTTGGCCCAGCAGAATTCCGGCGGT
TACAGATACGAAATTAATTGTGGCCTGGAATAGTTTGATGATTTCGGGATTGGCGCGGATCTATGGGGTTTTGGGTCTCG
AAAAAGCTTGGGAATTAGCCGTCAACTGTGTCAATTTTATCCTCGAACACCAATGGCAAGGAGGTCGTTTATATCGGCTA
AATTTTGACGGGGAAGCAGACGGGATGGCCCAGTCGGAAGATTATGCTTTCCTCATCAAAGCTTTGTTGGATTTGCAGAC
CAATCACCCTGAGCAGACGCATTGGCTCGAAAAGGCGATCGCCCTCCAGACAGAATTCGATCAGCAGTTTTGGTCAACGG
ATTTGAAGGGGTATTTTAACAACCGCCAAAGTCCCGAACTCTTGATCCAAGAACGCAGTTACCAAGACAATGCCACCCCT
GCGGCTAATGGTGTTGCCATCTGTAATTTGATGCGTCTTTTCTTGCTTACAGAAAATACCCAGTACCTCGACCGCGCCAC
GGATGCATTGCTGTCCTTTGGGTCTGTGCTCGAAAAATCCCCACAACAGTGCCCCACATTACTTTTAGCCTTGGATTGGT
ACTTACATGGCACCGTTGTAAAAGCGAAGCCGCAGCAATTATTGAAACTCAGAAAAACCCTGTTAAATTCGGTGGTGCTT
AAACCCACCCAGGAATTGCCTGCGGGGAGTATTGCCCTGGTGTGCCAAGGGTTGAATTGTTTAGAACCTTGTCGCAGCGA
AAGTCAATTGGCGACTCAGCTTCAAACAAGTTTACAGCGGTGA

Upstream 100 bases:

>100_bases
AAGATTGCTGTTCGATTCTAACTGATCACCCTGACAAATTTGGCACAGAATCCATTCGCTAGAATGCCTTTAGAAATTCT
TTCCAGGAGCAGCACTTTCC

Downstream 100 bases:

>100_bases
GGGGTGTGAATTAGGCAACTTCGGTTACGCTGGATTTGCGATTCAATCCGTCTTCTCCCCATAAGCGCCATGCCAGAGCA
TAGTCATTCCTCGCACCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVD
REERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEI
FTILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG
IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADS
FLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPR
QALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL
NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATP
AANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVL
KPTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR

Sequences:

>Translated_680_residues
MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVD
REERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEI
FTILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG
IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADS
FLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPR
QALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL
NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATP
AANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVL
KPTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR
>Mature_679_residues
ANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEAFSDPEIATYLNENFLPIKVDR
EERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYGGTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIF
TILDRSAQLPQGQAPLDQNLFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGGI
YDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAWLAREMTAPQGYFYAAQDADSF
LDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFIAPDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQ
ALDQFPPARDNTEAKATAWPSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRLN
FDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFNNRQSPELLIQERSYQDNATPA
ANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKSPQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLK
PTQELPAGSIALVCQGLNCLEPCRSESQLATQLQTSLQR

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=671, Percent_Identity=34.575260804769, Blast_Score=347, Evalue=2e-95,
Organism=Caenorhabditis elegans, GI25147430, Length=719, Percent_Identity=31.5716272600835, Blast_Score=330, Evalue=2e-90,
Organism=Drosophila melanogaster, GI20129985, Length=669, Percent_Identity=33.034379671151, Blast_Score=307, Evalue=1e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 76617; Mature: 76485

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEA
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC
FSDPEIATYLNENFLPIKVDREERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYG
CCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCC
GTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIFTILDRSAQLPQGQAPLDQN
CEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG
HHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEHHH
IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAW
HHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAREMTAPQGYFYAAQDADSFLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFI
HHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEEE
APDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQALDQFPPARDNTEAKATAW
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
PSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFN
ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRQSPELLIQERSYQDNATPAANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKS
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLKPTQELPAGSIALVCQGLNC
HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCH
LEPCRSESQLATQLQTSLQR
HHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANRLADTKSLYLRKHADNPIDWWYWCDEALAQAKAENKPIFLSIGYSSCHWCTVMEGEA
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCC
FSDPEIATYLNENFLPIKVDREERPDIDSIYMQALQLMTGQGGWPLNIFLTPADLMPFYG
CCCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCC
GTYFPVSPRYNRPGFLDVLMSLRRFFDEEPEKLQEIKTEIFTILDRSAQLPQGQAPLDQN
CEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LFLKGLEPCTAIVGRGDAGPSFPMIPYGAIALQGSRFTSNARHNGLLVSTKRGLDLALGG
HHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEEHHH
IYDHVGGGFHRYTVDPHWTVPHFEKMLYDNGQITEFLANLWAEGVTEPAFKTALEGTVAW
HHHHHCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LAREMTAPQGYFYAAQDADSFLDAGHPEPEEGAFYVWDYDELQTQLTAAQFAELEQAFFI
HHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEEE
APDGNFEGKIVLKRRQSTEISESLQGILDQLFTERYGTPRQALDQFPPARDNTEAKATAW
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
PSRIPAVTDTKLIVAWNSLMISGLARIYGVLGLEKAWELAVNCVNFILEHQWQGGRLYRL
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NFDGEADGMAQSEDYAFLIKALLDLQTNHPEQTHWLEKAIALQTEFDQQFWSTDLKGYFN
ECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRQSPELLIQERSYQDNATPAANGVAICNLMRLFLLTENTQYLDRATDALLSFGSVLEKS
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PQQCPTLLLALDWYLHGTVVKAKPQQLLKLRKTLLNSVVLKPTQELPAGSIALVCQGLNC
HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCH
LEPCRSESQLATQLQTSLQR
HHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]