Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079047

Identifier: 170079047

GI number: 170079047

Start: 2548021

End: 2550630

Strand: Reverse

Name: 170079047

Synonym: SYNPCC7002_A2452

Alternate gene names: NA

Gene position: 2550630-2548021 (Counterclockwise)

Preceding gene: 170079048

Following gene: 170079046

Centisome position: 84.79

GC content: 50.65

Gene sequence:

>2610_bases
GTGGCAACGGCTCCCTGTCTTCCTCAACCGGCTGATTACGAAGCGCTGATTACGACGGATATTTTCAAACCAGCGCGCTA
CTTGGGTAATGAACTGGGGGCAATCCATAAGCCTTGGCAAGGGGCAGTGGTGCGTTGGGTGCTGACCTATCCGGAAGTCT
ATGAGGTGGGTTCCTCAAATTTGGGCCATATCCTGCTCTACAACGTGATTAATGCCCAACCTCGACAGTTGTGCGATCGC
ACTTATCTACCCGCCGCTGATCTGAGCGAGAAGTTAAAGGAAAAAAATCTGCCGCTGTTTGCCCTCGAATCCAGGCGATC
GCTGTTGGAATTCGACATTCTCGGCTTTAGCTTGAGCTATGAACTGGGGGCGACAAATATTCTCGAAATGCTTACCCTTG
CCCAGATTCCCCTCACTTGGCAGGAACGAGATCAAGGAAATTATCCGTTCATTTTTGCGGGGGGACAAACAGCCACCTCC
AACCCAGAACCCTACGCTGACTTTTTCGACTTTATCGTTCTCGGCGATGGCGAAGAACTTTTGCCCGAAGTGGGTTTTAT
CCTCGAAGAAGCCAAGGTTAACGGTCTGAGTAAGGAAGAAACTCTGCTGGATTTAGCTCAAGTACCAGGGGTCTATGTGC
CTCGCTTCTATGCAATGGCGGCGGATGGTTCTGTGCATTCAACCCGTGACGAAGTGCCCAAGCGAATTTTGCGCCGTGTC
GCCACGCCAATTCCCGCCTATTCCATTGGTTTAGTGCCCTATGTGGAAACAGTTCATGATCGCCTGACGGTGGAAATTCG
CCGGGGTTGTACCCGGGGCTGCCGCTTCTGCCAACCGGGAATGTTAACGCGGCCTGCAACGGATGTCGAACCAGAGAAAG
TCGTCGATGCCATTGAAAAAGGAATGCGGGCGACGGGTTACAACGAATTTTCTCTACTTTCCCTCAGTTGTTCTGACTAT
CTCTCGTTGCCAGCGGTAGGAGTCGAGATTAAAAATCGCCTCAAGGACGAAAACATTTCCCTATCTCTGCCTAGCCAGCG
GGTTGATCGCTTTGATGAAAATATTGCCAATATTGTCGGTGGGACGCGTAAAGCGGGTTTAACCTTTGCCCCAGAAGCGG
GCACCCAACGAATGCGGGATGTGATCAATAAGGGTTTGACGAACGAAGAACTGCTACGGGGTATCCAAACCGCGGTAAAA
GAGGGCTGGGATAAGGTCAAGCTTTATTTCATGATCGGTCTCCCTGGAGAAACGGATCTCGATGTGTTGGGCATCGCGGA
AACGGTGCAATGGCTGCGGCGGGAATGTGCGTCCCTGAGCAATCGCCGTTTAAACTTCAACATCACCATTTCTAATTTCA
CCCCGAAACCCCACACACCTTTCCAGTGGCATTCGGTTTCGACGACAGAATTTAAGCGTAAACAGGAACTGTTGCGGGAA
GCTTTTCGACCGATTCGCGGCGTGAAGGTGAACTATACCGATGTGCGCATTTCAGCCATGGAGGATTTCGTTGGCCGGGG
CGATCGCCGTTTGGGTAAAGTCGTCCGCCGAGCCTGGGAACTGGGGGCGGGAATGGATTCTTGGTGGGAGAATTTAGACA
AAGCCTATGGCGCTTGGGAACAGGCGATCGCCGAATCCGATCTCACCTGGAAGTACCGCAAAGTCGAAAGTGGCGAGTGG
AATGTTTTTGAAACCACCGACAACGACCCCCTCGACGCCCCCTTGCCCTGGGATCACCTCAACACAGGCATTGATAAGCA
GTGGCTCAAGGACGATTTAAAGCGAGCCCTCGAAGCAGCAACCATTCCCGACTGTGCCTTTGATGGTTGTTCCCATTGTG
GCGTCTGCAGTACTGATTTTGGCCATAATGTCGTCTATCAACCGCCCGAAATTCCCGAATTTGTCGGTCAATTTCAAAAG
GATCAAGAACGCCTACAACGGTTCCGGGTTTGGTTCGGTAAGCAAGGGGATATGCGCCTGGTTAGTCACCTCGATTTAGT
CCGTTTATTTGACCGAGCTGTGCGCCGCGCTTCAATTCCCGTGGCTTTTACCAACGGCTTTCATCCGAGCCCCCGCATTT
CCATCGCCAATGCCCTATCATTAGGAGCCACCAGCTCAGGAGAAATTATTGATTTTGAGTTGCGCCAAGTCTTGGATTTA
GAAGATTTCCGGCGACGACTCGCTGAACAGTTGCCCATCGATATGCCGATCTATCGCGTTGAGGAAGTGCCCGTCCGTTC
TAAGGCTGCCACTGCGCTCCTTACGGAAGCAGAATACCTGATTGATCTTGAAACCGAAGAACCCGTTTCTGCCGTACAGT
GGGAAGCCTGGCTCGAAGTTATCCGTCAGACTCCGGAAATTCTCCTCGAAAAGAAAACGAAGTCTGGCAAAATTAAGCAA
CTGAATCTCCGAGAAATGTTAACGGCGATCGCCCTCGAAAAAGTCATTAGCCCCACCCAAGTCCAACTCCGTTATCGAGG
TAGTTGCCGCAATGATGGCACTTTATTACAAGCAGATCATATTCTTTATATGATGCATACTATGAGTCAGCAAAATATAA
AATTGCTTAAGGTACACCGCTTTATTCTGTACTTATCTGAAGATATTTAA

Upstream 100 bases:

>100_bases
CGCAGACATCCCAGTTACTCGCGGCCTAGCATCTCGAAAGCTCTCCGGTATAATGGGGGACTGAATTGTTTCCCTCGACT
CCCTTGGAGGTTCATCACCT

Downstream 100 bases:

>100_bases
TCTAGCTTAATTGATATTATCATTTCGCTTAAATATAACACCATCATCTGACTCGACTTCTCTCATTTATGTTCAAAAGA
CTGTCGTTATTCAAAAAGCA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 869; Mature: 868

Protein sequence:

>869_residues
MATAPCLPQPADYEALITTDIFKPARYLGNELGAIHKPWQGAVVRWVLTYPEVYEVGSSNLGHILLYNVINAQPRQLCDR
TYLPAADLSEKLKEKNLPLFALESRRSLLEFDILGFSLSYELGATNILEMLTLAQIPLTWQERDQGNYPFIFAGGQTATS
NPEPYADFFDFIVLGDGEELLPEVGFILEEAKVNGLSKEETLLDLAQVPGVYVPRFYAMAADGSVHSTRDEVPKRILRRV
ATPIPAYSIGLVPYVETVHDRLTVEIRRGCTRGCRFCQPGMLTRPATDVEPEKVVDAIEKGMRATGYNEFSLLSLSCSDY
LSLPAVGVEIKNRLKDENISLSLPSQRVDRFDENIANIVGGTRKAGLTFAPEAGTQRMRDVINKGLTNEELLRGIQTAVK
EGWDKVKLYFMIGLPGETDLDVLGIAETVQWLRRECASLSNRRLNFNITISNFTPKPHTPFQWHSVSTTEFKRKQELLRE
AFRPIRGVKVNYTDVRISAMEDFVGRGDRRLGKVVRRAWELGAGMDSWWENLDKAYGAWEQAIAESDLTWKYRKVESGEW
NVFETTDNDPLDAPLPWDHLNTGIDKQWLKDDLKRALEAATIPDCAFDGCSHCGVCSTDFGHNVVYQPPEIPEFVGQFQK
DQERLQRFRVWFGKQGDMRLVSHLDLVRLFDRAVRRASIPVAFTNGFHPSPRISIANALSLGATSSGEIIDFELRQVLDL
EDFRRRLAEQLPIDMPIYRVEEVPVRSKAATALLTEAEYLIDLETEEPVSAVQWEAWLEVIRQTPEILLEKKTKSGKIKQ
LNLREMLTAIALEKVISPTQVQLRYRGSCRNDGTLLQADHILYMMHTMSQQNIKLLKVHRFILYLSEDI

Sequences:

>Translated_869_residues
MATAPCLPQPADYEALITTDIFKPARYLGNELGAIHKPWQGAVVRWVLTYPEVYEVGSSNLGHILLYNVINAQPRQLCDR
TYLPAADLSEKLKEKNLPLFALESRRSLLEFDILGFSLSYELGATNILEMLTLAQIPLTWQERDQGNYPFIFAGGQTATS
NPEPYADFFDFIVLGDGEELLPEVGFILEEAKVNGLSKEETLLDLAQVPGVYVPRFYAMAADGSVHSTRDEVPKRILRRV
ATPIPAYSIGLVPYVETVHDRLTVEIRRGCTRGCRFCQPGMLTRPATDVEPEKVVDAIEKGMRATGYNEFSLLSLSCSDY
LSLPAVGVEIKNRLKDENISLSLPSQRVDRFDENIANIVGGTRKAGLTFAPEAGTQRMRDVINKGLTNEELLRGIQTAVK
EGWDKVKLYFMIGLPGETDLDVLGIAETVQWLRRECASLSNRRLNFNITISNFTPKPHTPFQWHSVSTTEFKRKQELLRE
AFRPIRGVKVNYTDVRISAMEDFVGRGDRRLGKVVRRAWELGAGMDSWWENLDKAYGAWEQAIAESDLTWKYRKVESGEW
NVFETTDNDPLDAPLPWDHLNTGIDKQWLKDDLKRALEAATIPDCAFDGCSHCGVCSTDFGHNVVYQPPEIPEFVGQFQK
DQERLQRFRVWFGKQGDMRLVSHLDLVRLFDRAVRRASIPVAFTNGFHPSPRISIANALSLGATSSGEIIDFELRQVLDL
EDFRRRLAEQLPIDMPIYRVEEVPVRSKAATALLTEAEYLIDLETEEPVSAVQWEAWLEVIRQTPEILLEKKTKSGKIKQ
LNLREMLTAIALEKVISPTQVQLRYRGSCRNDGTLLQADHILYMMHTMSQQNIKLLKVHRFILYLSEDI
>Mature_868_residues
ATAPCLPQPADYEALITTDIFKPARYLGNELGAIHKPWQGAVVRWVLTYPEVYEVGSSNLGHILLYNVINAQPRQLCDRT
YLPAADLSEKLKEKNLPLFALESRRSLLEFDILGFSLSYELGATNILEMLTLAQIPLTWQERDQGNYPFIFAGGQTATSN
PEPYADFFDFIVLGDGEELLPEVGFILEEAKVNGLSKEETLLDLAQVPGVYVPRFYAMAADGSVHSTRDEVPKRILRRVA
TPIPAYSIGLVPYVETVHDRLTVEIRRGCTRGCRFCQPGMLTRPATDVEPEKVVDAIEKGMRATGYNEFSLLSLSCSDYL
SLPAVGVEIKNRLKDENISLSLPSQRVDRFDENIANIVGGTRKAGLTFAPEAGTQRMRDVINKGLTNEELLRGIQTAVKE
GWDKVKLYFMIGLPGETDLDVLGIAETVQWLRRECASLSNRRLNFNITISNFTPKPHTPFQWHSVSTTEFKRKQELLREA
FRPIRGVKVNYTDVRISAMEDFVGRGDRRLGKVVRRAWELGAGMDSWWENLDKAYGAWEQAIAESDLTWKYRKVESGEWN
VFETTDNDPLDAPLPWDHLNTGIDKQWLKDDLKRALEAATIPDCAFDGCSHCGVCSTDFGHNVVYQPPEIPEFVGQFQKD
QERLQRFRVWFGKQGDMRLVSHLDLVRLFDRAVRRASIPVAFTNGFHPSPRISIANALSLGATSSGEIIDFELRQVLDLE
DFRRRLAEQLPIDMPIYRVEEVPVRSKAATALLTEAEYLIDLETEEPVSAVQWEAWLEVIRQTPEILLEKKTKSGKIKQL
NLREMLTAIALEKVISPTQVQLRYRGSCRNDGTLLQADHILYMMHTMSQQNIKLLKVHRFILYLSEDI

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 98531; Mature: 98400

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAPCLPQPADYEALITTDIFKPARYLGNELGAIHKPWQGAVVRWVLTYPEVYEVGSSN
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCC
LGHILLYNVINAQPRQLCDRTYLPAADLSEKLKEKNLPLFALESRRSLLEFDILGFSLSY
CCCEEEEHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHEEEEEEEEE
ELGATNILEMLTLAQIPLTWQERDQGNYPFIFAGGQTATSNPEPYADFFDFIVLGDGEEL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHEEEEEECCCHHH
LPEVGFILEEAKVNGLSKEETLLDLAQVPGVYVPRFYAMAADGSVHSTRDEVPKRILRRV
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
ATPIPAYSIGLVPYVETVHDRLTVEIRRGCTRGCRFCQPGMLTRPATDVEPEKVVDAIEK
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMRATGYNEFSLLSLSCSDYLSLPAVGVEIKNRLKDENISLSLPSQRVDRFDENIANIVG
CCHHCCCCCEEEEEECHHHHHCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHC
GTRKAGLTFAPEAGTQRMRDVINKGLTNEELLRGIQTAVKEGWDKVKLYFMIGLPGETDL
CCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
DVLGIAETVQWLRRECASLSNRRLNFNITISNFTPKPHTPFQWHSVSTTEFKRKQELLRE
HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHH
AFRPIRGVKVNYTDVRISAMEDFVGRGDRRLGKVVRRAWELGAGMDSWWENLDKAYGAWE
HHHHHCCCEEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QAIAESDLTWKYRKVESGEWNVFETTDNDPLDAPLPWDHLNTGIDKQWLKDDLKRALEAA
HHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHC
TIPDCAFDGCSHCGVCSTDFGHNVVYQPPEIPEFVGQFQKDQERLQRFRVWFGKQGDMRL
CCCCHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VSHLDLVRLFDRAVRRASIPVAFTNGFHPSPRISIANALSLGATSSGEIIDFELRQVLDL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHCCH
EDFRRRLAEQLPIDMPIYRVEEVPVRSKAATALLTEAEYLIDLETEEPVSAVQWEAWLEV
HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
IRQTPEILLEKKTKSGKIKQLNLREMLTAIALEKVISPTQVQLRYRGSCRNDGTLLQADH
HHHCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHH
ILYMMHTMSQQNIKLLKVHRFILYLSEDI
HHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATAPCLPQPADYEALITTDIFKPARYLGNELGAIHKPWQGAVVRWVLTYPEVYEVGSSN
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCC
LGHILLYNVINAQPRQLCDRTYLPAADLSEKLKEKNLPLFALESRRSLLEFDILGFSLSY
CCCEEEEHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHEEEEEEEEE
ELGATNILEMLTLAQIPLTWQERDQGNYPFIFAGGQTATSNPEPYADFFDFIVLGDGEEL
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHEEEEEECCCHHH
LPEVGFILEEAKVNGLSKEETLLDLAQVPGVYVPRFYAMAADGSVHSTRDEVPKRILRRV
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
ATPIPAYSIGLVPYVETVHDRLTVEIRRGCTRGCRFCQPGMLTRPATDVEPEKVVDAIEK
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMRATGYNEFSLLSLSCSDYLSLPAVGVEIKNRLKDENISLSLPSQRVDRFDENIANIVG
CCHHCCCCCEEEEEECHHHHHCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHC
GTRKAGLTFAPEAGTQRMRDVINKGLTNEELLRGIQTAVKEGWDKVKLYFMIGLPGETDL
CCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
DVLGIAETVQWLRRECASLSNRRLNFNITISNFTPKPHTPFQWHSVSTTEFKRKQELLRE
HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHH
AFRPIRGVKVNYTDVRISAMEDFVGRGDRRLGKVVRRAWELGAGMDSWWENLDKAYGAWE
HHHHHCCCEEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QAIAESDLTWKYRKVESGEWNVFETTDNDPLDAPLPWDHLNTGIDKQWLKDDLKRALEAA
HHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHC
TIPDCAFDGCSHCGVCSTDFGHNVVYQPPEIPEFVGQFQKDQERLQRFRVWFGKQGDMRL
CCCCHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VSHLDLVRLFDRAVRRASIPVAFTNGFHPSPRISIANALSLGATSSGEIIDFELRQVLDL
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHCCH
EDFRRRLAEQLPIDMPIYRVEEVPVRSKAATALLTEAEYLIDLETEEPVSAVQWEAWLEV
HHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHH
IRQTPEILLEKKTKSGKIKQLNLREMLTAIALEKVISPTQVQLRYRGSCRNDGTLLQADH
HHHCHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHH
ILYMMHTMSQQNIKLLKVHRFILYLSEDI
HHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]