| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079044
Identifier: 170079044
GI number: 170079044
Start: 2544617
End: 2545468
Strand: Direct
Name: 170079044
Synonym: SYNPCC7002_A2449
Alternate gene names: NA
Gene position: 2544617-2545468 (Clockwise)
Preceding gene: 170079043
Following gene: 170079049
Centisome position: 84.59
GC content: 35.68
Gene sequence:
>852_bases ATGAAATTCTCCTTAATCACCAGCACATTAGGTGAAGATAGGCATAATAAAATCGTGCGCCTAATTCACTCTTTAATAAA ACAAAAACATCAGGATTTTGAATTGATTATTGTCGATCAAAATGAGACTTCAAAACTCAAAGTAACATTAGAAAGTTATT TTAATGAGATTAATTTGATTTACCTGAAGCATGATCAAAGGGGGGTATCAGCGGGGAGGAATTTTGGATTTAGGTATGTA TCTGGTGAAATTGTCAGTTTTCCTGATGACGATTGCTGGTATCCAGATATACTTTTAATGTCAGTCAATACTTGGTTTTT AAATAATATTAATTGGGATGCTTTAAGTGGTTGTACTATTGATCTAAAAGAAAATTTGACAACAAGCAGATGGGATAAGA ATCCAGGAGAAATTCATAAGTTTAATGTCTGGCGTAGAGGAATTACTTCATCCATTTTTTTGCGAACCTATGCACTTGCA AACGCCCAAGGTTTTGATGAGACACTTGGACCAGGTGCAGACTCTCCTTGGCAATGCTCGGATGAGACTGATTATCTTCT AAACTTGCTATCACAAAATAAGAAACTATATTATGATCCAGAAGTAAAAGTCTACCATCTTGAACCAATTACCCAGTATG ACCAACAAGCATTGGCACGCGCAAAAAGGTATGCTCCAGGAACGGGCCGTGTATTAAAAAAGCATAGTTATCCATTTTGG TTTGTTGCAATCGCTTTATTAAGGCCAATTTTGGGAACTTTATATTATGCAACTAAAATGCAGGGATGGCGGGCTAAATT CCATTGGCTTATTTTTCAAGGTAGATTAAATGGTTGGCTTTCTTCTAAATAA
Upstream 100 bases:
>100_bases TCTTCATTACATGTAGTTCTGAAAATAAAGTCGCAATACTCTTGTATTTTATTTGGAACCGCTATATTTTAACTCCTTTT TTATAAGTGTTCTCTAGAAA
Downstream 100 bases:
>100_bases TTACTCCTAAAGCCTCTCAAAAAAGTAGATCAAAAAACAAGCCTGAAAATCAACTTAAATTCCGGAGAATTTGTCTGGTT TCTTGTCCTGTTTTTTCCCA
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Protein; Glycosyl Transferase Group 2 Family; WecB/TagA/CpsF Family Glycosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKFSLITSTLGEDRHNKIVRLIHSLIKQKHQDFELIIVDQNETSKLKVTLESYFNEINLIYLKHDQRGVSAGRNFGFRYV SGEIVSFPDDDCWYPDILLMSVNTWFLNNINWDALSGCTIDLKENLTTSRWDKNPGEIHKFNVWRRGITSSIFLRTYALA NAQGFDETLGPGADSPWQCSDETDYLLNLLSQNKKLYYDPEVKVYHLEPITQYDQQALARAKRYAPGTGRVLKKHSYPFW FVAIALLRPILGTLYYATKMQGWRAKFHWLIFQGRLNGWLSSK
Sequences:
>Translated_283_residues MKFSLITSTLGEDRHNKIVRLIHSLIKQKHQDFELIIVDQNETSKLKVTLESYFNEINLIYLKHDQRGVSAGRNFGFRYV SGEIVSFPDDDCWYPDILLMSVNTWFLNNINWDALSGCTIDLKENLTTSRWDKNPGEIHKFNVWRRGITSSIFLRTYALA NAQGFDETLGPGADSPWQCSDETDYLLNLLSQNKKLYYDPEVKVYHLEPITQYDQQALARAKRYAPGTGRVLKKHSYPFW FVAIALLRPILGTLYYATKMQGWRAKFHWLIFQGRLNGWLSSK >Mature_283_residues MKFSLITSTLGEDRHNKIVRLIHSLIKQKHQDFELIIVDQNETSKLKVTLESYFNEINLIYLKHDQRGVSAGRNFGFRYV SGEIVSFPDDDCWYPDILLMSVNTWFLNNINWDALSGCTIDLKENLTTSRWDKNPGEIHKFNVWRRGITSSIFLRTYALA NAQGFDETLGPGADSPWQCSDETDYLLNLLSQNKKLYYDPEVKVYHLEPITQYDQQALARAKRYAPGTGRVLKKHSYPFW FVAIALLRPILGTLYYATKMQGWRAKFHWLIFQGRLNGWLSSK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32955; Mature: 32955
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSLITSTLGEDRHNKIVRLIHSLIKQKHQDFELIIVDQNETSKLKVTLESYFNEINLI CCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHCCEEEE YLKHDQRGVSAGRNFGFRYVSGEIVSFPDDDCWYPDILLMSVNTWFLNNINWDALSGCTI EEECCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEEEEECEEEECCCCCCCCCCCEE DLKENLTTSRWDKNPGEIHKFNVWRRGITSSIFLRTYALANAQGFDETLGPGADSPWQCS ECCCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC DETDYLLNLLSQNKKLYYDPEVKVYHLEPITQYDQQALARAKRYAPGTGRVLKKHSYPFW CCHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHH FVAIALLRPILGTLYYATKMQGWRAKFHWLIFQGRLNGWLSSK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MKFSLITSTLGEDRHNKIVRLIHSLIKQKHQDFELIIVDQNETSKLKVTLESYFNEINLI CCEEEEHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHCCEEEE YLKHDQRGVSAGRNFGFRYVSGEIVSFPDDDCWYPDILLMSVNTWFLNNINWDALSGCTI EEECCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEEEEECEEEECCCCCCCCCCCEE DLKENLTTSRWDKNPGEIHKFNVWRRGITSSIFLRTYALANAQGFDETLGPGADSPWQCS ECCCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC DETDYLLNLLSQNKKLYYDPEVKVYHLEPITQYDQQALARAKRYAPGTGRVLKKHSYPFW CCHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHH FVAIALLRPILGTLYYATKMQGWRAKFHWLIFQGRLNGWLSSK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA