| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is folE [H]
Identifier: 170079039
GI number: 170079039
Start: 2537855
End: 2538574
Strand: Direct
Name: folE [H]
Synonym: SYNPCC7002_A2444
Alternate gene names: 170079039
Gene position: 2537855-2538574 (Clockwise)
Preceding gene: 170079038
Following gene: 170079043
Centisome position: 84.37
GC content: 50.56
Gene sequence:
>720_bases ATGACAACATCTTCTTCAAGCGGCTTCAATGGTTCTACAAAAACCATGGCGACTGATGCTCTAGGTCGTGACCTCAATGA TCTGGTGACTCGGCCAGACCGCAATAGCCACAATGGCAAAGCAGCAAGCATTCGCCCTGCCACAGAAGAAAGCCAGCAGA AAATGGCAGAGGCTGTGCATACGATGCTAGAAGCCGTTGGCGAAGATCCTGACCGTGAAGGTCTCCTAAAGACGCCGCTG CGGGTGGCAAAAGCCATGCAGTTTCTGACCCAAGGCTATAACCAGTCCCTTGAAGACATCGTCAATGGTGCAATTTTCGA TGAAGGGCACAATGAAATGGTATTGGTGCGGGACATCGATTTCTTTAGCCTCTGCGAACACCACATGTTGCCCTTTATGG GTCGGGCCCACGTGGCCTATATCCCGAATCAGAAAGTTGTGGGCCTCAGCAAATTAGCGCGGATCGTTGAAATGTATTCC CGTCGTCTCCAGGTGCAAGAACGTCTGACCCGACAAATTGCAGAAGCGGTCCAAGAAATCCTTGACCCCCAAGGGGTTGC GGTGGTGATGGAAGGGATTCACATGTGTATGTCCATGCGGGGTGTCCAAAAGCCCGGTTCTTGGACAGTTACCAGTGCCA TGATTGGGTGCTTCCAGAAAGAACAAAAAACCCGTGAAGAGTTTCTCAACTTGATTCGTCACCAACCCAGCTTTATTTAA
Upstream 100 bases:
>100_bases GACCATGATCTCTAAAGCAGGGAATCCAACAGTTTATTGTTAGCGAGGATCTACTCTCCCCTGCCCCAGTTCCTTTTACT TCTTCATTCCATACCGAATT
Downstream 100 bases:
>100_bases GGCAATTTGAGATTGTAGTGTCGCAATCTAAAACATAAAAAACATAAATAAGAGAAGGGCAGCCCTAGGGCTGCCCTTTT TGCTAAATTGCCTATCAGCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTTSSSSGFNGSTKTMATDALGRDLNDLVTRPDRNSHNGKAASIRPATEESQQKMAEAVHTMLEAVGEDPDREGLLKTPL RVAKAMQFLTQGYNQSLEDIVNGAIFDEGHNEMVLVRDIDFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYS RRLQVQERLTRQIAEAVQEILDPQGVAVVMEGIHMCMSMRGVQKPGSWTVTSAMIGCFQKEQKTREEFLNLIRHQPSFI
Sequences:
>Translated_239_residues MTTSSSSGFNGSTKTMATDALGRDLNDLVTRPDRNSHNGKAASIRPATEESQQKMAEAVHTMLEAVGEDPDREGLLKTPL RVAKAMQFLTQGYNQSLEDIVNGAIFDEGHNEMVLVRDIDFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYS RRLQVQERLTRQIAEAVQEILDPQGVAVVMEGIHMCMSMRGVQKPGSWTVTSAMIGCFQKEQKTREEFLNLIRHQPSFI >Mature_238_residues TTSSSSGFNGSTKTMATDALGRDLNDLVTRPDRNSHNGKAASIRPATEESQQKMAEAVHTMLEAVGEDPDREGLLKTPLR VAKAMQFLTQGYNQSLEDIVNGAIFDEGHNEMVLVRDIDFFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSR RLQVQERLTRQIAEAVQEILDPQGVAVVMEGIHMCMSMRGVQKPGSWTVTSAMIGCFQKEQKTREEFLNLIRHQPSFI
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=193, Percent_Identity=60.6217616580311, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI4503949, Length=193, Percent_Identity=60.6217616580311, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI66932970, Length=152, Percent_Identity=58.5526315789474, Blast_Score=200, Evalue=9e-52, Organism=Homo sapiens, GI66932972, Length=152, Percent_Identity=58.5526315789474, Blast_Score=200, Evalue=1e-51, Organism=Escherichia coli, GI1788476, Length=125, Percent_Identity=48, Blast_Score=120, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17560486, Length=184, Percent_Identity=60.8695652173913, Blast_Score=246, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6321706, Length=181, Percent_Identity=60.2209944751381, Blast_Score=235, Evalue=4e-63, Organism=Drosophila melanogaster, GI24656782, Length=189, Percent_Identity=60.8465608465608, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI24656791, Length=189, Percent_Identity=60.8465608465608, Blast_Score=235, Evalue=2e-62, Organism=Drosophila melanogaster, GI24656796, Length=189, Percent_Identity=60.8465608465608, Blast_Score=234, Evalue=3e-62,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26749; Mature: 26618
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSSSGFNGSTKTMATDALGRDLNDLVTRPDRNSHNGKAASIRPATEESQQKMAEAVH CCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TMLEAVGEDPDREGLLKTPLRVAKAMQFLTQGYNQSLEDIVNGAIFDEGHNEMVLVRDID HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCCCCCEEEEECCC FFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQVQERLTRQIAEAVQEI HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDPQGVAVVMEGIHMCMSMRGVQKPGSWTVTSAMIGCFQKEQKTREEFLNLIRHQPSFI HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTSSSSGFNGSTKTMATDALGRDLNDLVTRPDRNSHNGKAASIRPATEESQQKMAEAVH CCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH TMLEAVGEDPDREGLLKTPLRVAKAMQFLTQGYNQSLEDIVNGAIFDEGHNEMVLVRDID HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCCCCCEEEEECCC FFSLCEHHMLPFMGRAHVAYIPNQKVVGLSKLARIVEMYSRRLQVQERLTRQIAEAVQEI HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDPQGVAVVMEGIHMCMSMRGVQKPGSWTVTSAMIGCFQKEQKTREEFLNLIRHQPSFI HCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]