Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079014

Identifier: 170079014

GI number: 170079014

Start: 2508895

End: 2510472

Strand: Reverse

Name: 170079014

Synonym: SYNPCC7002_A2419

Alternate gene names: NA

Gene position: 2510472-2508895 (Counterclockwise)

Preceding gene: 170079017

Following gene: 170079010

Centisome position: 83.46

GC content: 48.92

Gene sequence:

>1578_bases
ATGACTATTGCACCACGCAGACAACCTAGCCGTACCAAACGTAATCGTACCAGTCTGCTTTTTGAGCGGGGTATGGCTCT
CTTGGCCTCTGCTAATTTGGTGTTAGTCCTCTTTGACCTGAGTTACATCCCCCTGCGTAATTTCTGGTTACAGGGCCGAG
TTCAATTTTACGCACGCATCGCTAAATATGAATGGAAATTTCCCGCCGAGCCGGTGCGTATTCTCCCGGTTAATGTAACC
CACGCCTATGACTGGGTAAAGGGCATCGAAGAAAATCGCGATACCGCCTACTATCTCCAACGGGTCGAAGATCTCCAAGC
AAAAATTCAGCAGATTAACGATCTGACCCTCCGGTCTACAGGTTCAAATAATGGCATTGTCGGTTCTGGCGATCGCCAAG
ACATCACCACCCAACTCCGCCGCTACAACCAAGAACAAGAAGCCATCCTTGCTGAACTCCGGGAACTGAGCGTTGAGATG
GTGGATACCAATCCCTTTGAAATTGCCAACAAAACAGGTACCCTCGAAAAAATCAAAAATCGCATGCGCCGCCATGTATT
TGGCGATGCCTCTGCCTCCTCCAAAGACGCCTTTCAACTCTTTTGGAGTAGCGAATATCTCTCAGAAAATGGCTGGCGTG
AAGAATTCAACTTTTACGAACGCGAAATCGAACCCCTCCTAGAAACCAACTATTTCCGTCCCATTGGCGAAAACGGCAAA
TACATTGATAACTTTGGCATTCTCGATTTTCCCTTCTTTCTCGCTTTCCTCCTCGAGTTTCTCGCCCGGAGTTGGTACAT
CAGTCGGCGTCGCACAGGCGTAAGTTGGTTTGATGCCATGCTCTGGCGTTGGTACGATATTTTTCTGCTGATTCCCCTTT
TCCGTTGGTTACGGGTGATTCCTGTGATCGTTCGTCTCAATCAAGCCGACCTTATTGATCTCAGCGCAATCCAAAAGCAA
GCCAGTCAAGGTTTTGTTGCTGGCATTGCCGAAGATATTACCGAAGTCGTTGTCATTCGGATTATCAATCAAATCCAAGG
CTCCATCCACCGGGGTGAATTTGCCACTCTTTTGGCCCAAACCACCAGCCGAGAATATGTCGATTTAAATGACATTAATG
AACCCGTCGAGCTCGCAAAGCTCATGGCCAACCTCTTAGTCCACCAAGTCTTACCCAAAATTCAGCCCGAGGCCGAAGCC
GTCATTCGCCATACCCTGGATCGAGTCATTTCCATGTCCCCTGCCTACCAAGGCTTACAGATGCTGCCCGGCATTGGCGA
TCTTAAAGGCACCCTGGCCAAGCAACTCTCCCATCAACTTTATCAAGTCACCGCAGACACCCTCAAAGCAGTCCTCGAAG
AAGACCCCGTCTTTGAACAACTGCTCGAAGAACTCTTAACCCAACTCACCAGCAGCATCACCTCCGAGATCCAAGGCCAA
GAAAGCCTCGCCCAAATGGAATCACTGATCAATGACCTCCTCGAAGAAGTCAAAATTAATTACGTTGAGAGACTCTCTGA
AGAAGATGTCGAAGACATTCTGGAACAAACCCGTGCCCTGCGGCAGATGACCCGTTAA

Upstream 100 bases:

>100_bases
ACCTTGTATTTAGTCCGCCTGCCCATAGAACCCGATAAAATAAACTGAAAATTTGATTCAATCCTGCTCAAAATTCACAA
AAAATCGCCCTTAATTTACC

Downstream 100 bases:

>100_bases
ATTCACCCATAAAAAAACGAGGGTAAATCACTTACCCCCGCTGTTTGTTTACATTGCCAATACGATTGAAATCACAATGG
CGATCGCTTACTTGGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MTIAPRRQPSRTKRNRTSLLFERGMALLASANLVLVLFDLSYIPLRNFWLQGRVQFYARIAKYEWKFPAEPVRILPVNVT
HAYDWVKGIEENRDTAYYLQRVEDLQAKIQQINDLTLRSTGSNNGIVGSGDRQDITTQLRRYNQEQEAILAELRELSVEM
VDTNPFEIANKTGTLEKIKNRMRRHVFGDASASSKDAFQLFWSSEYLSENGWREEFNFYEREIEPLLETNYFRPIGENGK
YIDNFGILDFPFFLAFLLEFLARSWYISRRRTGVSWFDAMLWRWYDIFLLIPLFRWLRVIPVIVRLNQADLIDLSAIQKQ
ASQGFVAGIAEDITEVVVIRIINQIQGSIHRGEFATLLAQTTSREYVDLNDINEPVELAKLMANLLVHQVLPKIQPEAEA
VIRHTLDRVISMSPAYQGLQMLPGIGDLKGTLAKQLSHQLYQVTADTLKAVLEEDPVFEQLLEELLTQLTSSITSEIQGQ
ESLAQMESLINDLLEEVKINYVERLSEEDVEDILEQTRALRQMTR

Sequences:

>Translated_525_residues
MTIAPRRQPSRTKRNRTSLLFERGMALLASANLVLVLFDLSYIPLRNFWLQGRVQFYARIAKYEWKFPAEPVRILPVNVT
HAYDWVKGIEENRDTAYYLQRVEDLQAKIQQINDLTLRSTGSNNGIVGSGDRQDITTQLRRYNQEQEAILAELRELSVEM
VDTNPFEIANKTGTLEKIKNRMRRHVFGDASASSKDAFQLFWSSEYLSENGWREEFNFYEREIEPLLETNYFRPIGENGK
YIDNFGILDFPFFLAFLLEFLARSWYISRRRTGVSWFDAMLWRWYDIFLLIPLFRWLRVIPVIVRLNQADLIDLSAIQKQ
ASQGFVAGIAEDITEVVVIRIINQIQGSIHRGEFATLLAQTTSREYVDLNDINEPVELAKLMANLLVHQVLPKIQPEAEA
VIRHTLDRVISMSPAYQGLQMLPGIGDLKGTLAKQLSHQLYQVTADTLKAVLEEDPVFEQLLEELLTQLTSSITSEIQGQ
ESLAQMESLINDLLEEVKINYVERLSEEDVEDILEQTRALRQMTR
>Mature_524_residues
TIAPRRQPSRTKRNRTSLLFERGMALLASANLVLVLFDLSYIPLRNFWLQGRVQFYARIAKYEWKFPAEPVRILPVNVTH
AYDWVKGIEENRDTAYYLQRVEDLQAKIQQINDLTLRSTGSNNGIVGSGDRQDITTQLRRYNQEQEAILAELRELSVEMV
DTNPFEIANKTGTLEKIKNRMRRHVFGDASASSKDAFQLFWSSEYLSENGWREEFNFYEREIEPLLETNYFRPIGENGKY
IDNFGILDFPFFLAFLLEFLARSWYISRRRTGVSWFDAMLWRWYDIFLLIPLFRWLRVIPVIVRLNQADLIDLSAIQKQA
SQGFVAGIAEDITEVVVIRIINQIQGSIHRGEFATLLAQTTSREYVDLNDINEPVELAKLMANLLVHQVLPKIQPEAEAV
IRHTLDRVISMSPAYQGLQMLPGIGDLKGTLAKQLSHQLYQVTADTLKAVLEEDPVFEQLLEELLTQLTSSITSEIQGQE
SLAQMESLINDLLEEVKINYVERLSEEDVEDILEQTRALRQMTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60775; Mature: 60644

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAPRRQPSRTKRNRTSLLFERGMALLASANLVLVLFDLSYIPLRNFWLQGRVQFYARI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AKYEWKFPAEPVRILPVNVTHAYDWVKGIEENRDTAYYLQRVEDLQAKIQQINDLTLRST
HHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
GSNNGIVGSGDRQDITTQLRRYNQEQEAILAELRELSVEMVDTNPFEIANKTGTLEKIKN
CCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHH
RMRRHVFGDASASSKDAFQLFWSSEYLSENGWREEFNFYEREIEPLLETNYFRPIGENGK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YIDNFGILDFPFFLAFLLEFLARSWYISRRRTGVSWFDAMLWRWYDIFLLIPLFRWLRVI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVIVRLNQADLIDLSAIQKQASQGFVAGIAEDITEVVVIRIINQIQGSIHRGEFATLLAQ
HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TTSREYVDLNDINEPVELAKLMANLLVHQVLPKIQPEAEAVIRHTLDRVISMSPAYQGLQ
HCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MLPGIGDLKGTLAKQLSHQLYQVTADTLKAVLEEDPVFEQLLEELLTQLTSSITSEIQGQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ESLAQMESLINDLLEEVKINYVERLSEEDVEDILEQTRALRQMTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIAPRRQPSRTKRNRTSLLFERGMALLASANLVLVLFDLSYIPLRNFWLQGRVQFYARI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AKYEWKFPAEPVRILPVNVTHAYDWVKGIEENRDTAYYLQRVEDLQAKIQQINDLTLRST
HHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEC
GSNNGIVGSGDRQDITTQLRRYNQEQEAILAELRELSVEMVDTNPFEIANKTGTLEKIKN
CCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHH
RMRRHVFGDASASSKDAFQLFWSSEYLSENGWREEFNFYEREIEPLLETNYFRPIGENGK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YIDNFGILDFPFFLAFLLEFLARSWYISRRRTGVSWFDAMLWRWYDIFLLIPLFRWLRVI
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVIVRLNQADLIDLSAIQKQASQGFVAGIAEDITEVVVIRIINQIQGSIHRGEFATLLAQ
HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TTSREYVDLNDINEPVELAKLMANLLVHQVLPKIQPEAEAVIRHTLDRVISMSPAYQGLQ
HCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MLPGIGDLKGTLAKQLSHQLYQVTADTLKAVLEEDPVFEQLLEELLTQLTSSITSEIQGQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH
ESLAQMESLINDLLEEVKINYVERLSEEDVEDILEQTRALRQMTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA