Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079010

Identifier: 170079010

GI number: 170079010

Start: 2501609

End: 2503018

Strand: Reverse

Name: 170079010

Synonym: SYNPCC7002_A2415

Alternate gene names: NA

Gene position: 2503018-2501609 (Counterclockwise)

Preceding gene: 170079014

Following gene: 170079009

Centisome position: 83.21

GC content: 52.84

Gene sequence:

>1410_bases
ATGCAAAAACCCATTCTTGTTGGCGGTTTAGGTTTAGCCTTATTTTTCGCAGTTTTGGGTCGCTGGCAGGGCAATATTTT
CGACCTTGGCGAATGGCTATTTTGGGGGGTGATCGCCTGGGGTGGCCTCCTGCTTTGGCAGAAAAAACAACCCCAATACC
CCCAGGACAATCCCCAAAATCCCCTTAAACGAAAAGACGTTGACCAAGCCATTGCAAACGCCCAACAGTGGGTGATGGCA
CTCCAGCAAGAAGTGCCCGATCAAGATTTCACAACCCTTAGGCAAACCCTGGATAACCTTAATCAAGAATTTCAACGGGA
CCACTTCACCGTGGCGATCGCCGGTGGCCGGGGCACTGGAAAAACAACCCTCCTCAGGCAGCTCCAAGCCACCGCACCAA
CTTATACCCTCCAGGAAACACCGCCCTTATTTACCGACCTCGCCAGCTATGACCAAGCGGCCCAAAACCAAGTCTTTGCC
GCCGACCTGGTGATTTTCCTGGTGAATGGGGATTTGATGGCCTCCCAATGGCAAACCCTCAACCATTGGCACCAAGCTCG
CCAGACAATCCTCATCGCCTTCAACAAGCAAGATCAATATCAGCCGGAGCAACGGGAATTGATCCTGAACCAACTGCGGA
ACCATTGTCAGCCGGCGATCGCTCCCCAAAATATTCTCCCCATCACCGCCGCGCCCCAGGCCATCAAAGTTAAAAAAATC
CAAGCCGATGGCACCGCCACCGAACATTTTGAACGCCCGGATCCAGTCGTTGCCCCCCTACAACATCAACTCCAAACCCT
CCTCAGTCAGCCCGAAACCCAACAACAACTGCTGTGGTCAACCATCTGGCGCACCGCACGGCTCACCCAGCACAATGCCA
AGCAAACCCTCAATCAATTCCGACGGGAACGGGCTTTACCGATCCTCGAAAAATATCAGTGGTTGGCGGCTGGGGCGACC
TTTGCCAATCCCGTCGCTGCTTTAGATTTACTCGCAACGGCAGCCGTAACAGGACAAATGATTATGGATGTGGGAGCGGT
CTATCAACAGCGTCTTTCTCTGGGTCAGGCCCAGGCGATCGCCACCACCCTCGGCAAACAAATGATCCAACTTGGCCTTG
TGGAACTCTCCACCCAAGCCGTCGGCGGAATGCTCAAAATCAACGCGATCACCTACCTTGCCGGGGGGGCTGTCCAGGGG
GTCAGTGCCGCCTATCTAACCCACATTGCGGGGCTGAGTTTAATCCAGTATTTCCAAGAACAAAACCCCCAAACTGCCTC
TGAATCTCTTAATTTCGAGAAACTCAGCCAGATTCTTAAGCGAGTTTTTGAGCAAAATCAGCGATCGCAATTTTTCGGCA
ATTTCGTGAAAGGCACCCTAAATCGCCTATCCCCCCAAACGATTAGCTAA

Upstream 100 bases:

>100_bases
TTCTTGAAAGATCCCTGGCGATCGCCCCCTACCCTTAAGGGCCAGCACCTTTCGCAGTAGCATAGATAGACGAATTGTTG
TATATGGCGGGGTAAGAACA

Downstream 100 bases:

>100_bases
GATCTATAGCTAGCCCAAAAAATCATAAAATTCATAACTCCCCTAAATTCCCATGGATATCGAACTCGAAAACCTAGAGG
CCTCCGTTGAAAATTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MQKPILVGGLGLALFFAVLGRWQGNIFDLGEWLFWGVIAWGGLLLWQKKQPQYPQDNPQNPLKRKDVDQAIANAQQWVMA
LQQEVPDQDFTTLRQTLDNLNQEFQRDHFTVAIAGGRGTGKTTLLRQLQATAPTYTLQETPPLFTDLASYDQAAQNQVFA
ADLVIFLVNGDLMASQWQTLNHWHQARQTILIAFNKQDQYQPEQRELILNQLRNHCQPAIAPQNILPITAAPQAIKVKKI
QADGTATEHFERPDPVVAPLQHQLQTLLSQPETQQQLLWSTIWRTARLTQHNAKQTLNQFRRERALPILEKYQWLAAGAT
FANPVAALDLLATAAVTGQMIMDVGAVYQQRLSLGQAQAIATTLGKQMIQLGLVELSTQAVGGMLKINAITYLAGGAVQG
VSAAYLTHIAGLSLIQYFQEQNPQTASESLNFEKLSQILKRVFEQNQRSQFFGNFVKGTLNRLSPQTIS

Sequences:

>Translated_469_residues
MQKPILVGGLGLALFFAVLGRWQGNIFDLGEWLFWGVIAWGGLLLWQKKQPQYPQDNPQNPLKRKDVDQAIANAQQWVMA
LQQEVPDQDFTTLRQTLDNLNQEFQRDHFTVAIAGGRGTGKTTLLRQLQATAPTYTLQETPPLFTDLASYDQAAQNQVFA
ADLVIFLVNGDLMASQWQTLNHWHQARQTILIAFNKQDQYQPEQRELILNQLRNHCQPAIAPQNILPITAAPQAIKVKKI
QADGTATEHFERPDPVVAPLQHQLQTLLSQPETQQQLLWSTIWRTARLTQHNAKQTLNQFRRERALPILEKYQWLAAGAT
FANPVAALDLLATAAVTGQMIMDVGAVYQQRLSLGQAQAIATTLGKQMIQLGLVELSTQAVGGMLKINAITYLAGGAVQG
VSAAYLTHIAGLSLIQYFQEQNPQTASESLNFEKLSQILKRVFEQNQRSQFFGNFVKGTLNRLSPQTIS
>Mature_469_residues
MQKPILVGGLGLALFFAVLGRWQGNIFDLGEWLFWGVIAWGGLLLWQKKQPQYPQDNPQNPLKRKDVDQAIANAQQWVMA
LQQEVPDQDFTTLRQTLDNLNQEFQRDHFTVAIAGGRGTGKTTLLRQLQATAPTYTLQETPPLFTDLASYDQAAQNQVFA
ADLVIFLVNGDLMASQWQTLNHWHQARQTILIAFNKQDQYQPEQRELILNQLRNHCQPAIAPQNILPITAAPQAIKVKKI
QADGTATEHFERPDPVVAPLQHQLQTLLSQPETQQQLLWSTIWRTARLTQHNAKQTLNQFRRERALPILEKYQWLAAGAT
FANPVAALDLLATAAVTGQMIMDVGAVYQQRLSLGQAQAIATTLGKQMIQLGLVELSTQAVGGMLKINAITYLAGGAVQG
VSAAYLTHIAGLSLIQYFQEQNPQTASESLNFEKLSQILKRVFEQNQRSQFFGNFVKGTLNRLSPQTIS

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52449; Mature: 52449

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPILVGGLGLALFFAVLGRWQGNIFDLGEWLFWGVIAWGGLLLWQKKQPQYPQDNPQN
CCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
PLKRKDVDQAIANAQQWVMALQQEVPDQDFTTLRQTLDNLNQEFQRDHFTVAIAGGRGTG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
KTTLLRQLQATAPTYTLQETPPLFTDLASYDQAAQNQVFAADLVIFLVNGDLMASQWQTL
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHEEEEECCCHHHHHHHHH
NHWHQARQTILIAFNKQDQYQPEQRELILNQLRNHCQPAIAPQNILPITAAPQAIKVKKI
HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEE
QADGTATEHFERPDPVVAPLQHQLQTLLSQPETQQQLLWSTIWRTARLTQHNAKQTLNQF
ECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRERALPILEKYQWLAAGATFANPVAALDLLATAAVTGQMIMDVGAVYQQRLSLGQAQAI
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTLGKQMIQLGLVELSTQAVGGMLKINAITYLAGGAVQGVSAAYLTHIAGLSLIQYFQE
HHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QNPQTASESLNFEKLSQILKRVFEQNQRSQFFGNFVKGTLNRLSPQTIS
CCCCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQKPILVGGLGLALFFAVLGRWQGNIFDLGEWLFWGVIAWGGLLLWQKKQPQYPQDNPQN
CCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCC
PLKRKDVDQAIANAQQWVMALQQEVPDQDFTTLRQTLDNLNQEFQRDHFTVAIAGGRGTG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
KTTLLRQLQATAPTYTLQETPPLFTDLASYDQAAQNQVFAADLVIFLVNGDLMASQWQTL
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHEEEEECCCHHHHHHHHH
NHWHQARQTILIAFNKQDQYQPEQRELILNQLRNHCQPAIAPQNILPITAAPQAIKVKKI
HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEE
QADGTATEHFERPDPVVAPLQHQLQTLLSQPETQQQLLWSTIWRTARLTQHNAKQTLNQF
ECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRERALPILEKYQWLAAGATFANPVAALDLLATAAVTGQMIMDVGAVYQQRLSLGQAQAI
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTLGKQMIQLGLVELSTQAVGGMLKINAITYLAGGAVQGVSAAYLTHIAGLSLIQYFQE
HHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QNPQTASESLNFEKLSQILKRVFEQNQRSQFFGNFVKGTLNRLSPQTIS
CCCCCHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA