| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079009
Identifier: 170079009
GI number: 170079009
Start: 2500534
End: 2501556
Strand: Reverse
Name: 170079009
Synonym: SYNPCC7002_A2414
Alternate gene names: NA
Gene position: 2501556-2500534 (Counterclockwise)
Preceding gene: 170079010
Following gene: 170079008
Centisome position: 83.16
GC content: 47.8
Gene sequence:
>1023_bases ATGGATATCGAACTCGAAAACCTAGAGGCCTCCGTTGAAAATTTGTTATCTGCGGCGAAGACCCACCTCGAAGAAAAAAA ATTACAGCAGCAGCGGGACGAACAATACCAAGATATTGTGCGCCAACGGGAAGCAAAACTGCACCCTCTGCTCAAAAAAG TCGAAGAGATGATCAGTACCTACCGGGCTGAAGGATATCATCATGCCGACATAATCCAACAATTACAAGAAAAAGCCGAT GATATTCGCCGTGAAATAGCAGAAATACCCGAAAAAGCCACAGAAATTGTCGATGCCCAGCTTGTCCTCCGGGAAGAAAG ACTTTTAGAAGAAAAAGCGCGGGAAAAAGTCCAACGCTGGCAGTCGGATCTCCGGGACGATCTGCTCGATATGATCTTTG AACAACAAGACTTTTTTAGTGCCACCGATGCGGCGATCGCCATCAAAGGCTATGTGGATGACCTCAAGGAAATAGGTTCT CTCGAAGAAGTGGTTGACGCCCTGATTAACCAAATAAACGAACACAGCGAAGAAGGCCCCGTGGCGCGACTGCGGGGAAC CCATGAACAAACCCTAAACTTTATCTATAACAAAGCCCTCGAAAACCGTTCCCGTACAGAACACCATCCCAATATTCAAC CCAAATCCCGCCACCGCAAATCGGACAAACGCCCGGAACTGTATGCAGACTTAGTTGGAAAAGTCTTAGTTTTTGGCGGA CATGATCGCCTCCAAACCGCCGTAAAGAATCGCCTGCGCAGTTCCCAGGTGGAATTGCAATGGTATAGCGAACAGGATGG TCTACAACTTTCTGCCCAGGGGGAAGCCCAGGTTACCAATGTTGACCTCATTCTCATTATCACGGGCTACGCCAGCCATT CCATGACGGAGCGGGCCATGGAAGCCTGTAAAAAAGCAGATAGGAAATATGAAATTATCAACACCACAGGCATGACCAGG GTACTAGAAGCCATCGAAGCAGGACTCAAAACCCAACAATTGGCACAACTCTGGAATAAGTAA
Upstream 100 bases:
>100_bases TTCGTGAAAGGCACCCTAAATCGCCTATCCCCCCAAACGATTAGCTAAGATCTATAGCTAGCCCAAAAAATCATAAAATT CATAACTCCCCTAAATTCCC
Downstream 100 bases:
>100_bases TCGCTCTATGGCAGTTCCCCCGAAGTTTCTGATTCAAACGGCACAATTTGTTTGGCATCGCCTGTGGCAAACCCTGATGT CTCAATTGGCCCCCAGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MDIELENLEASVENLLSAAKTHLEEKKLQQQRDEQYQDIVRQREAKLHPLLKKVEEMISTYRAEGYHHADIIQQLQEKAD DIRREIAEIPEKATEIVDAQLVLREERLLEEKAREKVQRWQSDLRDDLLDMIFEQQDFFSATDAAIAIKGYVDDLKEIGS LEEVVDALINQINEHSEEGPVARLRGTHEQTLNFIYNKALENRSRTEHHPNIQPKSRHRKSDKRPELYADLVGKVLVFGG HDRLQTAVKNRLRSSQVELQWYSEQDGLQLSAQGEAQVTNVDLILIITGYASHSMTERAMEACKKADRKYEIINTTGMTR VLEAIEAGLKTQQLAQLWNK
Sequences:
>Translated_340_residues MDIELENLEASVENLLSAAKTHLEEKKLQQQRDEQYQDIVRQREAKLHPLLKKVEEMISTYRAEGYHHADIIQQLQEKAD DIRREIAEIPEKATEIVDAQLVLREERLLEEKAREKVQRWQSDLRDDLLDMIFEQQDFFSATDAAIAIKGYVDDLKEIGS LEEVVDALINQINEHSEEGPVARLRGTHEQTLNFIYNKALENRSRTEHHPNIQPKSRHRKSDKRPELYADLVGKVLVFGG HDRLQTAVKNRLRSSQVELQWYSEQDGLQLSAQGEAQVTNVDLILIITGYASHSMTERAMEACKKADRKYEIINTTGMTR VLEAIEAGLKTQQLAQLWNK >Mature_340_residues MDIELENLEASVENLLSAAKTHLEEKKLQQQRDEQYQDIVRQREAKLHPLLKKVEEMISTYRAEGYHHADIIQQLQEKAD DIRREIAEIPEKATEIVDAQLVLREERLLEEKAREKVQRWQSDLRDDLLDMIFEQQDFFSATDAAIAIKGYVDDLKEIGS LEEVVDALINQINEHSEEGPVARLRGTHEQTLNFIYNKALENRSRTEHHPNIQPKSRHRKSDKRPELYADLVGKVLVFGG HDRLQTAVKNRLRSSQVELQWYSEQDGLQLSAQGEAQVTNVDLILIITGYASHSMTERAMEACKKADRKYEIINTTGMTR VLEAIEAGLKTQQLAQLWNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39272; Mature: 39272
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIELENLEASVENLLSAAKTHLEEKKLQQQRDEQYQDIVRQREAKLHPLLKKVEEMIST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRAEGYHHADIIQQLQEKADDIRREIAEIPEKATEIVDAQLVLREERLLEEKAREKVQRW HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSDLRDDLLDMIFEQQDFFSATDAAIAIKGYVDDLKEIGSLEEVVDALINQINEHSEEGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC VARLRGTHEQTLNFIYNKALENRSRTEHHPNIQPKSRHRKSDKRPELYADLVGKVLVFGG HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCC HDRLQTAVKNRLRSSQVELQWYSEQDGLQLSAQGEAQVTNVDLILIITGYASHSMTERAM HHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCEEECCEEEEEEECCHHHHHHHHHH EACKKADRKYEIINTTGMTRVLEAIEAGLKTQQLAQLWNK HHHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MDIELENLEASVENLLSAAKTHLEEKKLQQQRDEQYQDIVRQREAKLHPLLKKVEEMIST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRAEGYHHADIIQQLQEKADDIRREIAEIPEKATEIVDAQLVLREERLLEEKAREKVQRW HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSDLRDDLLDMIFEQQDFFSATDAAIAIKGYVDDLKEIGSLEEVVDALINQINEHSEEGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC VARLRGTHEQTLNFIYNKALENRSRTEHHPNIQPKSRHRKSDKRPELYADLVGKVLVFGG HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCC HDRLQTAVKNRLRSSQVELQWYSEQDGLQLSAQGEAQVTNVDLILIITGYASHSMTERAM HHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCEEECCEEEEEEECCHHHHHHHHHH EACKKADRKYEIINTTGMTRVLEAIEAGLKTQQLAQLWNK HHHHHCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA