| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079007
Identifier: 170079007
GI number: 170079007
Start: 2497801
End: 2499489
Strand: Reverse
Name: 170079007
Synonym: SYNPCC7002_A2412
Alternate gene names: NA
Gene position: 2499489-2497801 (Counterclockwise)
Preceding gene: 170079008
Following gene: 170079001
Centisome position: 83.09
GC content: 42.45
Gene sequence:
>1689_bases ATGGTCAATCTTGAGGACATCAGACCCGTCAAAACCCCCTTTAAACAGGAAGAATGGCGGCCTATCCTGATTGTTAGCGG CATCTTTTTTATCATCTGTATGGCTTTGGTGCTGCACCGTCATTTCACATTCTATTCCTCCTATGACCAAGGCATCTTCA ATCAGGTCATGTGGAATGGAGCCCATGGCCGTTTTTTTCAAAGTAGCCTCTCTTCACAGTTATCTACCAATGTTGTTCAT GCAGGGGAAGTCCCAGATGTCAGCTACCATCGCCTTGGGCAACACTTCACTCCTGCTCTACTTCTGTGGTTGCCAATTTA TTTCTTTTTTCCCCATGCTGCAACCCTAGCCGTACTTCTAGTTACCATGCTATCGGCAGCGGGTCTTGTTCTGTACCTAT TAGCACGACATTATCTAGATCCAGTTCCTGCCCGTTGGATTACCTATAGCTATTACGGTGCAAATGCTGTAATTGGCCCA ACTTTATGTAATTTTCACGATAATTTCCAGTTGCCTCTTTTTATCTTTACGTTGCTTTTAGCCATGGAAAAACGTTGGTG GTGGCTCTTTGGAATTATGTGTCCTTTGATCGTCATGATCCGTGAAGATAGCGGTATTGTTCTCTTCGGGGTGGGCGCTT ATATGATCCTTAGTCGTCGTTTTCCAAAAATCGGAGCGGCGGTCTGTTTGTTTAGCTTTGGGTATATTCTGCTGCTAACT AATTTAATTATGCCGATCTTTTCCGAGGATATTTCTAAGCGATTTATGCTCGAACGATTTGGGCAATATACAGACGCGGC AGAGGCTTCCACCCTTGATATTTTATTGGCAATGCTCTCCAATCCATTGTTACTTCTTAGGGAACTGGTTACTCCTTTTG ATCGGACAATTAAATATCTCGCAGGACAATTTTTGCCATTTGCTTTTGTCCCGGCAGTGGCTCCGAGTGCTTGGGCGCTC GCCGGATTTCCCTTGCTCAAACTTCTGTTAGGAAAAGGGATGTCTGTTCTCTCGATTAATATCCGCTATGCCCTTGCCGT TGTACCAGGTATTTGTTACGGGGTAATTTTATGGTGGTCTGGGGAAGGCTTTAATAATTTTTTCCGGAAAAACCAGCCCC GTCATCCCCGACAAATCAGCCCATTTTTTAAAAAATTCTGGATTACTTGTTTAACCTTATCTATCGCTTTTACCATCACA GCTAATCCTAACCGGACACTTTACTTTATGATTCCGGATTCTTTGCAACCTTGGGTTTATGTGTCCCCGATTGAGCAATG GTCTCGCAGTGTTGATATTCAGGGCATGATTGGCCGTATTCCTCAGGATGCAAGCGTCTCCGCAACAACCTACATCATTC CTCATTTATCTAGTCGTCGAGAAATTATTCGTTTACCCGGCATCGAAATTGAAAACGATCAACAAAACATCGAAAAAGTT GATTTTATTGTGGCAGATCTATGGCGTCTAGTGCGTTATCAAGTCGCTTTTGATGAGGATTGGCAACGATTGAAAGATTA TGTTGGGGTAATTGATCAAATTGTTGATCAAAATGAATATGGCATTGTTGATTTTAAAGAAGGCGTTATTTTGTTAGAAA AAGGAAAAAGTTCAACACCTGATTCAAAACAGCAGTGGAGAGCATATCGACAAACTTTGATCCCGATCTTAAGTAAAAAC GATAATTGA
Upstream 100 bases:
>100_bases ATCGCTTTCAATCCCCCCATGACCGCCACACTTTAGCCATCAATTCCGACGATTCCTAACTCTGATAAGATTTTGGAGAT TCATTGTTAGGCAGTGTTCT
Downstream 100 bases:
>100_bases ATATAAAAAAATTACCCCCTAATATCTTTACGGTATTGGGGGTCAACGAGATAATTTAGAGATTCATTTTTGGGTATTCT GTTTAATCGAGATCAGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN DN
Sequences:
>Translated_562_residues MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN DN >Mature_562_residues MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNGAHGRFFQSSLSSQLSTNVVH AGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLLVTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGP TLCNFHDNFQLPLFIFTLLLAMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYLAGQFLPFAFVPAVAPSAWAL AGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWSGEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTIT ANPNRTLYFMIPDSLQPWVYVSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTPDSKQQWRAYRQTLIPILSKN DN
Specific function: Unknown
COG id: COG3463
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64430; Mature: 64430
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNG CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC AHGRFFQSSLSSQLSTNVVHAGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLL CCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGPTLCNFHDNFQLPLFIFTLLL HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEECCHHCCCCCCCCCHHHHHHHHH AMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT HHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH AGQFLPFAFVPAVAPSAWALAGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWS HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEEEEC GEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTITANPNRTLYFMIPDSLQPWVY CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE VSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV ECCHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEECCCHHHHHHH DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC DSKQQWRAYRQTLIPILSKNDN CHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNLEDIRPVKTPFKQEEWRPILIVSGIFFIICMALVLHRHFTFYSSYDQGIFNQVMWNG CCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC AHGRFFQSSLSSQLSTNVVHAGEVPDVSYHRLGQHFTPALLLWLPIYFFFPHAATLAVLL CCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VTMLSAAGLVLYLLARHYLDPVPARWITYSYYGANAVIGPTLCNFHDNFQLPLFIFTLLL HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCEECCHHCCCCCCCCCHHHHHHHHH AMEKRWWWLFGIMCPLIVMIREDSGIVLFGVGAYMILSRRFPKIGAAVCLFSFGYILLLT HHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLIMPIFSEDISKRFMLERFGQYTDAAEASTLDILLAMLSNPLLLLRELVTPFDRTIKYL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHH AGQFLPFAFVPAVAPSAWALAGFPLLKLLLGKGMSVLSINIRYALAVVPGICYGVILWWS HHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHEEEEEC GEGFNNFFRKNQPRHPRQISPFFKKFWITCLTLSIAFTITANPNRTLYFMIPDSLQPWVY CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCEE VSPIEQWSRSVDIQGMIGRIPQDASVSATTYIIPHLSSRREIIRLPGIEIENDQQNIEKV ECCHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEECCCHHHHHHH DFIVADLWRLVRYQVAFDEDWQRLKDYVGVIDQIVDQNEYGIVDFKEGVILLEKGKSSTP HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC DSKQQWRAYRQTLIPILSKNDN CHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA