The gene/protein map for NC_008609 is currently unavailable.
Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is psaK [H]

Identifier: 170078996

GI number: 170078996

Start: 2485668

End: 2485931

Strand: Direct

Name: psaK [H]

Synonym: SYNPCC7002_A2401

Alternate gene names: 170078996

Gene position: 2485668-2485931 (Clockwise)

Preceding gene: 170078995

Following gene: 170078997

Centisome position: 82.63

GC content: 55.68

Gene sequence:

>264_bases
ATGTCCCTTGCCCTTACCGTTGCTGCCGCTGTGCCCACCACCATGGCCTGGAGCCCCAAAGTCGCCGTTGTGATGGTGAT
TTGTAATGTTTTGGCGATCGCCATTGGGAAAGCCACCATTAAGCACCCTTCCGAAGGCCCCGAATTGCCGATGCCTGATA
TGTTTGGTGGCATGGGTCTTCCTGCACTCCTCGCAACCACGAGTTTCGGACATATCCTCGGTGTTGGGGTAATCCTCGGC
TTGGGTAGCATGGGTGCGATCTAA

Upstream 100 bases:

>100_bases
GCAAAGGAAATAAAGCAAAGGCTCAGCTTTGGGCAAAACTAGGGACAATTACGCTAAAAAATCCAAAATTTATTTAATTG
TTATTTAGGAGTCAAGATTT

Downstream 100 bases:

>100_bases
AGAATCTGTGTTTGCTGGTCTGAATTTGAGCTTGTTATTTTTAAAATTCGTCGTTTTGTCTTTTGTTTTGGAGAAGGTTG
TTGCATCCCCGGAGTTTTTC

Product: photosystem I reaction center subunit X

Products: NA

Alternate protein names: Photosystem I subunit X [H]

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSLALTVAAAVPTTMAWSPKVAVVMVICNVLAIAIGKATIKHPSEGPELPMPDMFGGMGLPALLATTSFGHILGVGVILG
LGSMGAI

Sequences:

>Translated_87_residues
MSLALTVAAAVPTTMAWSPKVAVVMVICNVLAIAIGKATIKHPSEGPELPMPDMFGGMGLPALLATTSFGHILGVGVILG
LGSMGAI
>Mature_86_residues
SLALTVAAAVPTTMAWSPKVAVVMVICNVLAIAIGKATIKHPSEGPELPMPDMFGGMGLPALLATTSFGHILGVGVILGL
GSMGAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaG/psaK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000549
- InterPro:   IPR017492 [H]

Pfam domain/function: PF01241 PSI_PSAK [H]

EC number: NA

Molecular weight: Translated: 8685; Mature: 8554

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS01026 PHOTOSYSTEM_I_PSAGK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALTVAAAVPTTMAWSPKVAVVMVICNVLAIAIGKATIKHPSEGPELPMPDMFGGMGL
CCCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
PALLATTSFGHILGVGVILGLGSMGAI
HHHHHHHCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SLALTVAAAVPTTMAWSPKVAVVMVICNVLAIAIGKATIKHPSEGPELPMPDMFGGMGL
CCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
PALLATTSFGHILGVGVILGLGSMGAI
HHHHHHHCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA