| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078987
Identifier: 170078987
GI number: 170078987
Start: 2471830
End: 2473617
Strand: Reverse
Name: 170078987
Synonym: SYNPCC7002_A2392
Alternate gene names: NA
Gene position: 2473617-2471830 (Counterclockwise)
Preceding gene: 170078989
Following gene: 170078986
Centisome position: 82.23
GC content: 55.09
Gene sequence:
>1788_bases ATGGGATTACGTCGTTGGCAATGGTTCTTGGGGACAGTGGGTTGTTTTGGGCTGAGTTTTGGGACACCTAATTTGCTGGT GGGAGACTTGGCAAGTCCGCGGGCGATCGCCAATCCCGTGAGCCTTAATACCCAAATCCAAGCCAAGGGCAGTCAAATTC GCCTCAATGGTCAAACCCTCCGGGGAGCCTGGGCCCAATGGTCAGAAAATGGCACTGTGCGTCTGGGGATTGAATCGATG ACCCTAGAAAAAACCCTGGGGATGGAATTGGGGAATGGCCTCGATTTGGGACAACAACCAGTCACCTGGTTTGACGATAC TCCCTACCAATTGCCGATTCGCTTTGCCGCTCCCTACCGTTACCTCGATGTGACCGCTTTGGCCGCAGCGCAGCAATGGC AGGCTCGGCCCAACGGCAATGTTCTGGAACTGACGACGCCCAAGGGACAAATTTTGAGTGTCCGCCAGGGGAAACAGACC TGGGGCACGCGCTTGGTCATTGATCTAGACCGGCCTGTGCTCTGGCAAAAGGTGAGCCCCACAAAACTGCGGCTCCAGAG TGATTATGGAGTGACGGCCCAACGGCTTAGGGGGCAATTAACGGCGAATGCACTGCCGTTTACCCTCAACGATAGTAACG GTTTAACGGAACTTGTCTTTAAAGCGGGGGCTCCAGAGATCCAGGTCTTTAGTTTGGCGAACCCACCCCGCCTAGTGGTC GATTTGCGATCACAACCAGAAAATCAAAATCGGTCTGTGCAATGGCTCCCTGGGGTGCAGTGGCGACAGGAAAATTTTGC GGCCAGTTCTGGGCCTGTGCGGGTGACTTGGCTCGAAATTGACCCCACCCAACGGCAACTCCAGCTTAAGCCAATCACTC CGGATAACAACACAATTGTGGGGTTAGCGCCCCTGTTGATCCAGGCAGACACCAATCAGGCGATCGCCGCCATTAATGCG GGCTTTTTTAACCGCAATAACCAATATCCCCTGGGAATTGTCCAAGGCAATCGAGCTTTGCGTTCGGGGCCAATTCTCAA TCGGGGAGCAGTGGCCTGGGATAATGCGGGCCGCTGGGAATTTGACCGCCTCAAAGTCGAAACCGATATTGTTGCAGGCA ATGGTGAACGGGTCGGGGTTGAACTGATCAATAGCGGCTATGTGAAAGCCGGGGCCGCCCTGTATGACCGCGCCTGGGGC AGTCGTTACACCACAGCCGTTGATCATGAAATTGTGCTGACAGTGATGACCTCCGGGGGCCGCGACCAGGTCATTCGCCA GGAAACGGCGGGGAAAGCGGGCCAAAATAGTTATGAAATTCCCCAGGGTGGTTATTTGTTGGTCTTCCGCTCCTTTCGCA CCGGGGCGGCCAAATTTCCCGTGGGGGTGACCCTAGAACGGCGACCCAGATTTACCCCCAATAGTTTTGCGACGTTACCG AATATTGTCGGTGGTGGCCCGCTCCTCCTGAAGAATGGTCAGGTTGTTCTCAATGGCCAGGCAGAACAGTTTAGTACGGC CTTCAATATTCAGTCAGCTTCCCGCAGTGCGATCGCCAGAACCCGAGACAACAAAATATTGCTGGTGACCCTCCACGGCG CGGCAGAAGAAACAGCCGGGGCAACCCTCAACGAATGGGCGAATATTCTCCGCCGTCTGGGGGCCACGGATGCCTTGAAT TTAGATGGAGGTGGATCTTCGGCTCTCGCCCTTGGCGCTAATTTAAGCGATCGCCACCCCACTACCGCCGGACGGGTTAA CAACGGTATCGGCTTGTTTTTAGAATAG
Upstream 100 bases:
>100_bases TAGGGAATACCGTTAAAGGGCAGTCGTTTGGGGGGCGTGAAACATTTCCCCTGGGATAAAGTCAGTGTTTGTTGATGTTG TAAGGAAAGAGTAGGCTTTG
Downstream 100 bases:
>100_bases AACCGACGCACACTAATCCCTGCCCGAATTACCGATGAATAAACGCCTTGTCCAAGTCATTGTCTTTGTGATGATCGTTC TGTTGCTGGTGCCCCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MGLRRWQWFLGTVGCFGLSFGTPNLLVGDLASPRAIANPVSLNTQIQAKGSQIRLNGQTLRGAWAQWSENGTVRLGIESM TLEKTLGMELGNGLDLGQQPVTWFDDTPYQLPIRFAAPYRYLDVTALAAAQQWQARPNGNVLELTTPKGQILSVRQGKQT WGTRLVIDLDRPVLWQKVSPTKLRLQSDYGVTAQRLRGQLTANALPFTLNDSNGLTELVFKAGAPEIQVFSLANPPRLVV DLRSQPENQNRSVQWLPGVQWRQENFAASSGPVRVTWLEIDPTQRQLQLKPITPDNNTIVGLAPLLIQADTNQAIAAINA GFFNRNNQYPLGIVQGNRALRSGPILNRGAVAWDNAGRWEFDRLKVETDIVAGNGERVGVELINSGYVKAGAALYDRAWG SRYTTAVDHEIVLTVMTSGGRDQVIRQETAGKAGQNSYEIPQGGYLLVFRSFRTGAAKFPVGVTLERRPRFTPNSFATLP NIVGGGPLLLKNGQVVLNGQAEQFSTAFNIQSASRSAIARTRDNKILLVTLHGAAEETAGATLNEWANILRRLGATDALN LDGGGSSALALGANLSDRHPTTAGRVNNGIGLFLE
Sequences:
>Translated_595_residues MGLRRWQWFLGTVGCFGLSFGTPNLLVGDLASPRAIANPVSLNTQIQAKGSQIRLNGQTLRGAWAQWSENGTVRLGIESM TLEKTLGMELGNGLDLGQQPVTWFDDTPYQLPIRFAAPYRYLDVTALAAAQQWQARPNGNVLELTTPKGQILSVRQGKQT WGTRLVIDLDRPVLWQKVSPTKLRLQSDYGVTAQRLRGQLTANALPFTLNDSNGLTELVFKAGAPEIQVFSLANPPRLVV DLRSQPENQNRSVQWLPGVQWRQENFAASSGPVRVTWLEIDPTQRQLQLKPITPDNNTIVGLAPLLIQADTNQAIAAINA GFFNRNNQYPLGIVQGNRALRSGPILNRGAVAWDNAGRWEFDRLKVETDIVAGNGERVGVELINSGYVKAGAALYDRAWG SRYTTAVDHEIVLTVMTSGGRDQVIRQETAGKAGQNSYEIPQGGYLLVFRSFRTGAAKFPVGVTLERRPRFTPNSFATLP NIVGGGPLLLKNGQVVLNGQAEQFSTAFNIQSASRSAIARTRDNKILLVTLHGAAEETAGATLNEWANILRRLGATDALN LDGGGSSALALGANLSDRHPTTAGRVNNGIGLFLE >Mature_594_residues GLRRWQWFLGTVGCFGLSFGTPNLLVGDLASPRAIANPVSLNTQIQAKGSQIRLNGQTLRGAWAQWSENGTVRLGIESMT LEKTLGMELGNGLDLGQQPVTWFDDTPYQLPIRFAAPYRYLDVTALAAAQQWQARPNGNVLELTTPKGQILSVRQGKQTW GTRLVIDLDRPVLWQKVSPTKLRLQSDYGVTAQRLRGQLTANALPFTLNDSNGLTELVFKAGAPEIQVFSLANPPRLVVD LRSQPENQNRSVQWLPGVQWRQENFAASSGPVRVTWLEIDPTQRQLQLKPITPDNNTIVGLAPLLIQADTNQAIAAINAG FFNRNNQYPLGIVQGNRALRSGPILNRGAVAWDNAGRWEFDRLKVETDIVAGNGERVGVELINSGYVKAGAALYDRAWGS RYTTAVDHEIVLTVMTSGGRDQVIRQETAGKAGQNSYEIPQGGYLLVFRSFRTGAAKFPVGVTLERRPRFTPNSFATLPN IVGGGPLLLKNGQVVLNGQAEQFSTAFNIQSASRSAIARTRDNKILLVTLHGAAEETAGATLNEWANILRRLGATDALNL DGGGSSALALGANLSDRHPTTAGRVNNGIGLFLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64726; Mature: 64595
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRRWQWFLGTVGCFGLSFGTPNLLVGDLASPRAIANPVSLNTQIQAKGSQIRLNGQTL CCCCHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHCCCCCCCEEEEECCCEEEECCCEE RGAWAQWSENGTVRLGIESMTLEKTLGMELGNGLDLGQQPVTWFDDTPYQLPIRFAAPYR ECHHHHCCCCCEEEEEEEHEEEHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCEE YLDVTALAAAQQWQARPNGNVLELTTPKGQILSVRQGKQTWGTRLVIDLDRPVLWQKVSP EEEHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCC TKLRLQSDYGVTAQRLRGQLTANALPFTLNDSNGLTELVFKAGAPEIQVFSLANPPRLVV CEEEEECCCCCCHHHHCCEEECCEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCEEEE DLRSQPENQNRSVQWLPGVQWRQENFAASSGPVRVTWLEIDPTQRQLQLKPITPDNNTIV EECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEE GLAPLLIQADTNQAIAAINAGFFNRNNQYPLGIVQGNRALRSGPILNRGAVAWDNAGRWE EEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCE FDRLKVETDIVAGNGERVGVELINSGYVKAGAALYDRAWGSRYTTAVDHEIVLTVMTSGG EEEEEEEEEEEECCCCEEEEEEECCCCEECCHHHHHHCCCCCCEEEECCEEEEEEEECCC RDQVIRQETAGKAGQNSYEIPQGGYLLVFRSFRTGAAKFPVGVTLERRPRFTPNSFATLP HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHCC NIVGGGPLLLKNGQVVLNGQAEQFSTAFNIQSASRSAIARTRDNKILLVTLHGAAEETAG HHCCCCEEEEECCEEEECCCHHHHHEEEEECCCCHHHHHEECCCEEEEEEECCCCCHHCC ATLNEWANILRRLGATDALNLDGGGSSALALGANLSDRHPTTAGRVNNGIGLFLE CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure GLRRWQWFLGTVGCFGLSFGTPNLLVGDLASPRAIANPVSLNTQIQAKGSQIRLNGQTL CCCHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHCCCCCCCEEEEECCCEEEECCCEE RGAWAQWSENGTVRLGIESMTLEKTLGMELGNGLDLGQQPVTWFDDTPYQLPIRFAAPYR ECHHHHCCCCCEEEEEEEHEEEHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCEE YLDVTALAAAQQWQARPNGNVLELTTPKGQILSVRQGKQTWGTRLVIDLDRPVLWQKVSP EEEHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCC TKLRLQSDYGVTAQRLRGQLTANALPFTLNDSNGLTELVFKAGAPEIQVFSLANPPRLVV CEEEEECCCCCCHHHHCCEEECCEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCEEEE DLRSQPENQNRSVQWLPGVQWRQENFAASSGPVRVTWLEIDPTQRQLQLKPITPDNNTIV EECCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEE GLAPLLIQADTNQAIAAINAGFFNRNNQYPLGIVQGNRALRSGPILNRGAVAWDNAGRWE EEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCE FDRLKVETDIVAGNGERVGVELINSGYVKAGAALYDRAWGSRYTTAVDHEIVLTVMTSGG EEEEEEEEEEEECCCCEEEEEEECCCCEECCHHHHHHCCCCCCEEEECCEEEEEEEECCC RDQVIRQETAGKAGQNSYEIPQGGYLLVFRSFRTGAAKFPVGVTLERRPRFTPNSFATLP HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHCC NIVGGGPLLLKNGQVVLNGQAEQFSTAFNIQSASRSAIARTRDNKILLVTLHGAAEETAG HHCCCCEEEEECCEEEECCCHHHHHEEEEECCCCHHHHHEECCCEEEEEEECCCCCHHCC ATLNEWANILRRLGATDALNLDGGGSSALALGANLSDRHPTTAGRVNNGIGLFLE CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA