| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078973
Identifier: 170078973
GI number: 170078973
Start: 2460084
End: 2460377
Strand: Direct
Name: 170078973
Synonym: SYNPCC7002_A2378
Alternate gene names: NA
Gene position: 2460084-2460377 (Clockwise)
Preceding gene: 170078972
Following gene: 170078974
Centisome position: 81.78
GC content: 49.32
Gene sequence:
>294_bases ATGAGCACTTTGATCAATATTCTCAGCTACGGCTGCATCATTGTGGGGGTGATTTTCTGGTTTTGGGGCACTGCGCCGCT ACTGGGTAATCGTTCTGTGTTGTTTAAATTGCATACTCTGTCGGTCTCTGACACCTTGGGTTCGATGGCGATTATGGCGG GGCTACTGCTAAAAATTCCTAGGGAATGGCCCCTGCTGATTTTGGCGATTATTGCCCTTGCCATTTGGAATACGGTACTG GGGTATGTGCTGGCCTATTGTTCGAGTCGTGGAGGCGGTGATGAACGGATCTAA
Upstream 100 bases:
>100_bases GGGATGACTGGACGGTCGGGGTTGTCGGTGTCCTAATTTTGTGCGTCGGCAATGCAGCGTTAATGCTACTAGCTCACATT TTGAGGCGGGTGAATTTACC
Downstream 100 bases:
>100_bases TTTTGACTGGTTTGTGGGGGCGATCGCCTTGTTATTGCCCGTGACGGGGGGATTATTAGTCGCCCAAAAAAATCCTTACT ATGCGTTGGTGATTCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSTLINILSYGCIIVGVIFWFWGTAPLLGNRSVLFKLHTLSVSDTLGSMAIMAGLLLKIPREWPLLILAIIALAIWNTVL GYVLAYCSSRGGGDERI
Sequences:
>Translated_97_residues MSTLINILSYGCIIVGVIFWFWGTAPLLGNRSVLFKLHTLSVSDTLGSMAIMAGLLLKIPREWPLLILAIIALAIWNTVL GYVLAYCSSRGGGDERI >Mature_96_residues STLINILSYGCIIVGVIFWFWGTAPLLGNRSVLFKLHTLSVSDTLGSMAIMAGLLLKIPREWPLLILAIIALAIWNTVLG YVLAYCSSRGGGDERI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10581; Mature: 10450
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLINILSYGCIIVGVIFWFWGTAPLLGNRSVLFKLHTLSVSDTLGSMAIMAGLLLKIP CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC REWPLLILAIIALAIWNTVLGYVLAYCSSRGGGDERI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STLINILSYGCIIVGVIFWFWGTAPLLGNRSVLFKLHTLSVSDTLGSMAIMAGLLLKIP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC REWPLLILAIIALAIWNTVLGYVLAYCSSRGGGDERI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA