Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is bicA [H]

Identifier: 170078966

GI number: 170078966

Start: 2452833

End: 2454533

Strand: Direct

Name: bicA [H]

Synonym: SYNPCC7002_A2371

Alternate gene names: 170078966

Gene position: 2452833-2454533 (Clockwise)

Preceding gene: 170078964

Following gene: 170078967

Centisome position: 81.54

GC content: 53.79

Gene sequence:

>1701_bases
ATGCAGATAACCAACAAAATTCACTTTAGGAATATCCGCGGCGATATTTTTGGCGGGCTAACGGCGGCGGTCATTGCGTT
GCCCATGGCCCTCGCCTTCGGGGTGGCATCCGGTGCCGGGGCAGAAGCCGGTCTCTGGGGTGCTGTGCTTGTGGGCTTCT
TTGCCGCCCTCTTTGGGGGAACCCCCACCCTCATTTCCGAACCCACAGGGCCGATGACGGTGGTTATGACCGCTGTGATT
GCCCATTTCACGGCCAGCGCCGCTACTCCAGAAGAAGGTTTGGCGATCGCCTTTACCGTCGTGATGATGGCCGGGGTGTT
CCAAATTATTTTTGGCTCCCTCAAACTCGGCAAATACGTCACCATGATGCCCTACACCGTGATTTCTGGCTTCATGTCAG
GGATCGGGATCATCCTGGTCATTTTGCAATTAGCGCCCTTCCTGGGACAGGCGAGTCCGGGGGGCGGCGTCATCGGCACG
CTCCAAAATTTACCCACACTGCTGAGTAATATTCAACCGGGCGAAACAGCCTTAGCTTTAGGCACCGTGGCGATCATCTG
GTTTATGCCAGAGAAGTTTAAAAAGGTAATCCCGCCCCAATTGGTCGCCCTTGTCTTGGGGACAGTAATCGCCTTTTTTG
TTTTCCCGCCAGAAGTAAGCGATCTCCGTCGCATCGGTGAAATTCGAGCTGGGTTCCCAGAGCTGGTCAGACCGAGCTTT
AGTCCGGTTGAATTCCAGAGAATGATCCTCGATGCGGCAGTGCTAGGGATGCTCGGTTGTATCGATGCCCTCTTGACGTC
TGTCGTCGCCGATAGCTTGACCCGGACAGAGCATAATTCCAACAAAGAATTAATTGGCCAAGGTCTAGGGAACCTCTTTT
CTGGCTTGTTCGGCGGGATTGCTGGGGCTGGGGCCACCATGGGGACTGTGGTAAATATCCAGTCCGGTGGTCGAACGGCG
CTTTCTGGATTGGTACGGGCCTTTGTCCTGTTGGTTGTGATCCTTGGGGCGGCTAGTTTAACGGCAACCATCCCCCTGGC
TGTGCTTGCTGGGATTGCCTTCAAGGTCGGGGTTGACATCATTGACTGGAGTTTCCTAAAACGGGCCCACGAAATTTCCC
CCAAGGGGGCACTGATCATGTACGGCGTCATTCTGTTGACGGTCTTAGTTGACTTGATTGTCGCCGTGGGTGTGGGTGTG
TTTGTCGCTAATGTGCTCACCATCGAACGGATGAGTAATCTCCAGTCTGAAAAAGTCCAAACGGTTAGTGATGCTGACGA
TAATATCCGCCTGACTACCACTGAAAAACGCTGGTTGGATGAAGGCCAAGGCCGTGTTCTTTTGTTTCAACTCAGTGGGC
CGATGATCTTTGGGGTCGCAAAGGCGATCGCCAGAGAACACAATGCGATGGGTGACTGTGATGCCCTCGTCTTTGATATC
GGTGAAGTGCCCCACATGGGGGTTACCGCTTCCCTAGCCTTAGAAAATGCCATTGAAGAGGCCCTCGACAAAGAACGTCA
GGTTTATATTGTCGGTGCTGCGGGCCAAACCCGTCGCCGTCTGGAAAAACTCAAGCTCTTTAAGCGGGTTCCCCCCGATA
AATGTTTGATGTCGCGGGAAGAAGCCCTCAAGAATGCCGTGCTCGGAATCTATCCCCATTTGGCGGATGGTGTTACGGCT
CCCAGTTCAGAGATGGGTTAA

Upstream 100 bases:

>100_bases
TTGCACTGACAACTTAACTCACACCCAACAGGCTAAGCAACGAATCCTTTATGGTTTGTTTAAGTGCTTTGCTCATCACT
GATCTGAAAAATGCGTAACC

Downstream 100 bases:

>100_bases
GGCCCTGATCTGCGGTGGGTTCCTGGCTATCTTGGTCTAACCTTCCGGCTTATCTCAGGACGGTATGGTCGGCAGATAGC
CCTCTCCAGGTTCGATGCAA

Product: bicarbonate transporter, BicA

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI
AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT
LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF
SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA
LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV
FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI
GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA
PSSEMG

Sequences:

>Translated_566_residues
MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI
AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT
LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF
SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA
LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV
FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI
GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA
PSSEMG
>Mature_566_residues
MQITNKIHFRNIRGDIFGGLTAAVIALPMALAFGVASGAGAEAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVVMTAVI
AHFTASAATPEEGLAIAFTVVMMAGVFQIIFGSLKLGKYVTMMPYTVISGFMSGIGIILVILQLAPFLGQASPGGGVIGT
LQNLPTLLSNIQPGETALALGTVAIIWFMPEKFKKVIPPQLVALVLGTVIAFFVFPPEVSDLRRIGEIRAGFPELVRPSF
SPVEFQRMILDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLFSGLFGGIAGAGATMGTVVNIQSGGRTA
LSGLVRAFVLLVVILGAASLTATIPLAVLAGIAFKVGVDIIDWSFLKRAHEISPKGALIMYGVILLTVLVDLIVAVGVGV
FVANVLTIERMSNLQSEKVQTVSDADDNIRLTTTEKRWLDEGQGRVLLFQLSGPMIFGVAKAIAREHNAMGDCDALVFDI
GEVPHMGVTASLALENAIEEALDKERQVYIVGAAGQTRRRLEKLKLFKRVPPDKCLMSREEALKNAVLGIYPHLADGVTA
PSSEMG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI4557535, Length=376, Percent_Identity=24.468085106383, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI20336282, Length=549, Percent_Identity=22.5865209471767, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI16306483, Length=549, Percent_Identity=22.5865209471767, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI16418413, Length=366, Percent_Identity=22.9508196721311, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI217272867, Length=366, Percent_Identity=22.9508196721311, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4505697, Length=375, Percent_Identity=22.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081859, Length=430, Percent_Identity=30, Blast_Score=151, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI86564876, Length=515, Percent_Identity=23.1067961165049, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI86564196, Length=530, Percent_Identity=22.6415094339623, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86565215, Length=368, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551690, Length=382, Percent_Identity=21.4659685863874, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193203292, Length=508, Percent_Identity=21.6535433070866, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=578, Percent_Identity=19.3771626297578, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19922482, Length=512, Percent_Identity=23.6328125, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24651449, Length=439, Percent_Identity=23.9179954441913, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666186, Length=410, Percent_Identity=22.9268292682927, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24647160, Length=440, Percent_Identity=20.2272727272727, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355087, Length=440, Percent_Identity=20.2272727272727, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21358633, Length=427, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59606; Mature: 59606

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCHHHHCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]