| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is bvgS [H]
Identifier: 170078960
GI number: 170078960
Start: 2447288
End: 2448406
Strand: Reverse
Name: bvgS [H]
Synonym: SYNPCC7002_A2365
Alternate gene names: 170078960
Gene position: 2448406-2447288 (Counterclockwise)
Preceding gene: 170078962
Following gene: 170078959
Centisome position: 81.4
GC content: 49.87
Gene sequence:
>1119_bases ATGCAATATAATCCTGCTCTAATTCAAGCCCTTGGCGACATCGTCTATGAACGCTGTTTAACCTCAGGTGCAATGGTGTG GTACGGGGATTTTACGCGGGTTTTGGGGTATTCGGCGGCGGAAATGGGTAATGATTGTCAAACTTGGCTAGAGCGGCTCT ATCCGGACGATCAAACGAAAGTTTTGGCCACCCTCGAACAAGCCTTCGCCCAACAGCAAGCCTACGAGTTGGACTATCGA TTCCAGCACCATGACGGTTCCTATGTTTGGATCCAAGACCGGGGAGTTCCTAAGGATATTACTGCGCAAGATTCGGATCA GTTTTGGGTGATTGGGGTGATGCGTGACATTAGCGATCGCAAACAGGTAGAGCTAGATATGCACAATGCCCTGATGCGCG AAAAAGAACTCAATCAACTGAAAACCCGTTTCATTGACATTGCCTCCCATGAATTCCGCACCCCTTTGACCTCGATTTTG GGCTTTACTGAACTCCTCGAACAATACGCCCACAAATTCAACCCAGAAGCGCAACGGCGGCATCTACAGCGAATTAAAGG GGCGGCCCAACGGCTCCAAACCCTCGTTGACGATGTCCTTTCGGTCAGTCGCGTCGATGCAGGACAACTCACCCTAGAGC CAGCGCCCGTGCATTTTGAAGGGCTGTGCCAGGACATCATCGAAGAGTTGCAAGTGGTGTTTGGCCATACCCACCCGATC CGGTTTGATTTCGTTCCCCAATACCAAGGCGATCGCCGCCTCTTACCCGTCCTAGACGCCAAGATTATCCGCCACATTCT GTCTAATTTACTCTCGAATGCCCTCAAATACTCTTTTCCCGGTGAAGCCGTCAGCCTAGTAGTTTGTTGTGGCGATCGCC AAATCAGCATCACCATCACTGACCGGGGAATTGGCATTCCCCAAGCCGATTTACCACATTTATTTGAACCCTTTCACCGG GCTCAAAATGTTGGCAAAATTCCAGGCACAGGCTTAGGACTACACATTGTGAAACGTTACATTGACTTACACAATGGTAC GATTATGGTCGCAAGTCTCGTGAATTCTGGCACCACATTCCGCGTTAAAATTCCCTGCTCTTTCGTGAGTAAACCCTGA
Upstream 100 bases:
>100_bases CAAACTTTTCAAATTGATTGCCGTTTAAGGGTCAGCAATTTCCCATCATTTCTCGTCTGATTTTCCTTTTTTTTTCTGTG CGTCTTATCTCACCCTGCCC
Downstream 100 bases:
>100_bases CTGACGCATCAAGTCCCATGAGAAACATCTACTATGGTTGCCTCCTCACTTTCCCCCACCATTCTCGTCATTGAAGACGA AGATTCGATCCGAGAGCTCA
Product: two-component hybrid sensor kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP
Sequences:
>Translated_372_residues MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP >Mature_372_residues MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=323, Percent_Identity=28.1733746130031, Blast_Score=111, Evalue=9e-26, Organism=Escherichia coli, GI1789149, Length=247, Percent_Identity=32.3886639676113, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI145693157, Length=260, Percent_Identity=30, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788713, Length=271, Percent_Identity=29.8892988929889, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=30, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=26.7241379310345, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=28.8617886178862, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=25.2100840336134, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786783, Length=263, Percent_Identity=28.1368821292776, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=26.4705882352941, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=27.4131274131274, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=28.3898305084746, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790861, Length=294, Percent_Identity=22.108843537415, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42259; Mature: 42259
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTK CCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHCCCHHHHHHHHHCCCCHHH VLATLEQAFAQQQAYELDYRFQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDR HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCCH KQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSILGFTELLEQYAHKFNPEAQRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH HLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITIT EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEE DRGIGIPQADLPHLFEPFHRAQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTF ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCEE RVKIPCSFVSKP EEEECHHCCCCC >Mature Secondary Structure MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTK CCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHCCCHHHHHHHHHCCCCHHH VLATLEQAFAQQQAYELDYRFQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDR HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCCH KQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSILGFTELLEQYAHKFNPEAQRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH HLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITIT EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEE DRGIGIPQADLPHLFEPFHRAQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTF ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCEE RVKIPCSFVSKP EEEECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]