| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ytfP [H]
Identifier: 170078950
GI number: 170078950
Start: 2436346
End: 2437578
Strand: Direct
Name: ytfP [H]
Synonym: SYNPCC7002_A2355
Alternate gene names: 170078950
Gene position: 2436346-2437578 (Clockwise)
Preceding gene: 170078947
Following gene: 170078951
Centisome position: 80.99
GC content: 51.91
Gene sequence:
>1233_bases ATGGCAAGATTAATCGTCGTTGGGGGCGGTGCGGCGGGTTTTTTTGGGGCGATCGCCGCTGCCCGGACGAACCCAAAGTT AGAGGTGATTATCCTCGAAGCGGGTAAAACATTTTTGAGCAAAGTGAAAATCTCTGGGGGCGGCCGCTGTAATGTTACCC ACCATTGCTTTGATCCCGTGGAATTAGTCAAGGCCTATCCGAGGGGCCAGCGGGAATTACGGGGGGCCTTCAGTCAGTTT CAACCCCAGGACATGATTGCTTGGCTCAAGGCCGAAGGGGTCAAGCTCAAAACCGAAGTCGACGGACGAATGTTCCCGGT GACAGACGATTCCGAAACGATTATCCGGGCTTTTCTCGCAGCAGCAACCCAGGCAAAAATCCAATGTCGCACCGGGGCTG TTGTGCAAAGCATTATTCAAGATGAAACAGGACAATTTCAGGTGAATCTCAAGGGGGGCGATCGCCTTTTGGCTGATTTC ATTTTGTTGGCGACGGGAAGTCATCCTTCCGGGCATCGATTGGCCGCCACCTTGGGCCACAAGATTATTCCGCCGCAACC ATCGTTATTTACGTTCCAGATTAATGATCCCCGTCTTCAGGGTTTAGCGGGAGTGAGTGTGTCTGAGGCGACCGTCAGCA TCAAGTTAGATAAAAAGAAAAAGCTCGAACAAATGGGGCCACTGCTGATTACCCATTGGGGCCTCAGTGGGCCAGCGGTT TTAAAACTCTCGGCTTGGGGGGCGCGCACGTTAGCCGAACACCGCTACACAATGTCCCTCACGGTGAATTGGCTCCCCGA CATTAATCCAGAAACCCTCCGTCAAGACATCCAAACTTTTAAGACCCAACATCCCAAAAAGAAAATTACGACCCTTGCTC CAGTAGACCTTCCCAAGCGTCTATGGCAAAGTTTGACCCAAGCTGCGGGGATCAGCCCCGATCAAAATTGGGCGGATCTC GCGAAAAAACAACTGAATATCCTCTGTCAAGAATTAACCCAGGGCCAATACAACATCCAAGGGAAGGGCGTTTTCAAAGA AGAATTTGTCACCTGCGGCGGTGTTTCCCTCAAGGAAGTGAACTTCAAAACCCTCGAAAGTCGCCGTTGTCCTGGCCTCT TTTTCGCCGGGGAAGTGCTCGACATCGATGGGATTACGGGGGGCTTCAATTTCCAGAGTGCTTGGACGACCAGTTGGCTC GCGGGTCAGGCGATCGCCCAAAATATTCATTAA
Upstream 100 bases:
>100_bases TACGCTACTGCCGGGGGGCATCATCAATATCATGTTGCTCCTGACGCTCCTTTCTGGGATCCTCTATGGGCTGGAGTGGA CAAAGAATTACTAACAAACC
Downstream 100 bases:
>100_bases GATCACAACAACCTCATTCTTTTTTAAACCATGGTTCAAGCCGCGCCTCACCCCCAACATGTGACGTTTAGCGACCTCGC CCAGGCCGCCATTCAGCTAA
Product: FAD dependent oxidoreductase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQF QPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADF ILLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADL AKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWL AGQAIAQNIH
Sequences:
>Translated_410_residues MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQF QPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADF ILLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADL AKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWL AGQAIAQNIH >Mature_409_residues ARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQFQ PQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFI LLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAVL KLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADLA KKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLA GQAIAQNIH
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367234, Length=393, Percent_Identity=30.0254452926209, Blast_Score=165, Evalue=6e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44776; Mature: 44645
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPV CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHEEEECCCCEECCCCCCCCHH ELVKAYPRGQRELRGAFSQFQPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLA HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHH AATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFILLATGSHPSGHRLAATLGH HHHHCEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHEEEECCCCCCCCHHHHHCC KIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV CCCCCCCCEEEEEECCCHHCCCCCCEEECEEEEEEECHHHHHHHHCCEEEEECCCCCCEE LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKR EEEECCCCHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEECCCCHHHH LWQSLTQAAGISPDQNWADLAKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEECCCEEEEC NFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLAGQAIAQNIH CHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPV EEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHEEEECCCCEECCCCCCCCHH ELVKAYPRGQRELRGAFSQFQPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLA HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHH AATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFILLATGSHPSGHRLAATLGH HHHHCEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHEEEECCCCCCCCHHHHHCC KIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV CCCCCCCCEEEEEECCCHHCCCCCCEEECEEEEEEECHHHHHHHHCCEEEEECCCCCCEE LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKR EEEECCCCHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEECCCCHHHH LWQSLTQAAGISPDQNWADLAKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEECCCEEEEC NFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLAGQAIAQNIH CHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]