| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is mco [H]
Identifier: 170078914
GI number: 170078914
Start: 2397690
End: 2399129
Strand: Reverse
Name: mco [H]
Synonym: SYNPCC7002_A2319
Alternate gene names: 170078914
Gene position: 2399129-2397690 (Counterclockwise)
Preceding gene: 170078915
Following gene: 170078913
Centisome position: 79.76
GC content: 52.08
Gene sequence:
>1440_bases ATGGGCATTAAGCGGCGTGAGTTTCTCGGTTTAACGGCCTTGGGCGCAACGGGAGCATTGCTTTGGCAGGGGCGCAATCT CCTCCGAAGCCGAAACTCTAGTCCTTTAGCCGCCCCCATACCAGAGATTTATCGTAGTGAAGGGGGTTCCCTGGAAATTA ACCTCGAAGCCCGCTATGAAGATGTAATCCTTGGGGGAGAACCCACGCGCAACATGATGACCTACAACGGTCAAATCCCT GGCCCCCGCTTGGAAGTTCGACCGGGCGATCGCCTAATTATTCACTTTAAAAATAGCCTCGATCAACCGACAAATCTACA CTTCCACGGACTGCATCTTTCCCCAGAGGGCAACCAGGATAATGTATTCCTCCACATCGAACCAGGGGAAACTTTTCACT ACGAACTGGAAATTCATCCCCAACAGCGGGCTGGCACTTACTGGTACCACCCCCACCACCATGGTTTTGTCGCCGAACAG TTATTTCAGGGGTTAGCTGGGCTGATCGTTGTGCGGGGGGACTTGGATGAACTGCCAGAAATCCGTGCCGCCCAAGAGGA ATTTTTTGTTCTCCAGGATTTTAACCGTGATCGCCCACCCCAAGGAATGATGGGCTCCCACATGAATTTGATGGCGGGTC GAGAAGGGAATCTAATTACGGTCAATGGTCTTTTTCACCCAGAAATCGCCGTGACCAAAGACCTGGTGCGGCTGCGGTTA CTGAATGCGTCCCCCTCGCGGTTCTATCGTCTCCAACTCTATGGCCAAAAGTTAATGCAAATTGCCGGAGATGATGGTGC TTTTTCTCAACCCCTGGAGCGGGATGAATTACTTTTAACCCCAGGTCAACGGGCGGAGGTGCTCATCAAAACCCAGGATC TACCGAAAACGCCGATCCATTTACTCAACCTTCCTTATCAACGCGCCCAGATAGGGATAATGGGACAGCAATACAACAAT GCCACCGTGGCGATCGCCGATTTTACCCCCAGTGCTCCAACCTTCGCCCCGGTGCAAATTCCCGCCCAATTAATTCCCGT TGAACCTTTACCGGAGCCGAGCCGAACCCGTCGTTTTACCCTGAACCATGGCATGGTACCAGGACAGGGAATGGCTTTTT TGATCAATGGGGAAGCCTACCGGGATCAACCCCAAACCACCGTCCGCTTGAACGATGTGGAGGATTGGGAAATTGTGAAT ACGGGCACAATGGATCACCCCTTCCATGTCCATGTGAATGGTTTTCAGGTGGTGAGCCGCAACGGTGTACCGGAAGAAAA TATTGCCTGGGCAGATACGGTACTGGTGCGGGTCGGGGAAACGGTCAAAATCAGAATCGCTTTCCGGGATTTTGCAGGGA AGACGGTCTACCATTGTCACATTCTCGACCATGAAGACCTTGGCATGATGGGCCAACTGGAAATTCTACCCGCTTCATAA
Upstream 100 bases:
>100_bases AGCGGGCGATCGCCAACAGCCCTACCAAGTTTTGGCACTCCATGAAGATGGCACGACTTCTGTCTTTCAGGAATATCCAG GTAATTAAGGGTTACAGACA
Downstream 100 bases:
>100_bases AACGTGAAATTGCGGCCTTGACTCTCCAGTGCACTAGAGCTTTTATCCTGGAGCCAGCACTTGAATCATCGAGGAAAGTT CGCCATGGAAACCCGCCAGT
Product: Type 3 multicopper oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MGIKRREFLGLTALGATGALLWQGRNLLRSRNSSPLAAPIPEIYRSEGGSLEINLEARYEDVILGGEPTRNMMTYNGQIP GPRLEVRPGDRLIIHFKNSLDQPTNLHFHGLHLSPEGNQDNVFLHIEPGETFHYELEIHPQQRAGTYWYHPHHHGFVAEQ LFQGLAGLIVVRGDLDELPEIRAAQEEFFVLQDFNRDRPPQGMMGSHMNLMAGREGNLITVNGLFHPEIAVTKDLVRLRL LNASPSRFYRLQLYGQKLMQIAGDDGAFSQPLERDELLLTPGQRAEVLIKTQDLPKTPIHLLNLPYQRAQIGIMGQQYNN ATVAIADFTPSAPTFAPVQIPAQLIPVEPLPEPSRTRRFTLNHGMVPGQGMAFLINGEAYRDQPQTTVRLNDVEDWEIVN TGTMDHPFHVHVNGFQVVSRNGVPEENIAWADTVLVRVGETVKIRIAFRDFAGKTVYHCHILDHEDLGMMGQLEILPAS
Sequences:
>Translated_479_residues MGIKRREFLGLTALGATGALLWQGRNLLRSRNSSPLAAPIPEIYRSEGGSLEINLEARYEDVILGGEPTRNMMTYNGQIP GPRLEVRPGDRLIIHFKNSLDQPTNLHFHGLHLSPEGNQDNVFLHIEPGETFHYELEIHPQQRAGTYWYHPHHHGFVAEQ LFQGLAGLIVVRGDLDELPEIRAAQEEFFVLQDFNRDRPPQGMMGSHMNLMAGREGNLITVNGLFHPEIAVTKDLVRLRL LNASPSRFYRLQLYGQKLMQIAGDDGAFSQPLERDELLLTPGQRAEVLIKTQDLPKTPIHLLNLPYQRAQIGIMGQQYNN ATVAIADFTPSAPTFAPVQIPAQLIPVEPLPEPSRTRRFTLNHGMVPGQGMAFLINGEAYRDQPQTTVRLNDVEDWEIVN TGTMDHPFHVHVNGFQVVSRNGVPEENIAWADTVLVRVGETVKIRIAFRDFAGKTVYHCHILDHEDLGMMGQLEILPAS >Mature_478_residues GIKRREFLGLTALGATGALLWQGRNLLRSRNSSPLAAPIPEIYRSEGGSLEINLEARYEDVILGGEPTRNMMTYNGQIPG PRLEVRPGDRLIIHFKNSLDQPTNLHFHGLHLSPEGNQDNVFLHIEPGETFHYELEIHPQQRAGTYWYHPHHHGFVAEQL FQGLAGLIVVRGDLDELPEIRAAQEEFFVLQDFNRDRPPQGMMGSHMNLMAGREGNLITVNGLFHPEIAVTKDLVRLRLL NASPSRFYRLQLYGQKLMQIAGDDGAFSQPLERDELLLTPGQRAEVLIKTQDLPKTPIHLLNLPYQRAQIGIMGQQYNNA TVAIADFTPSAPTFAPVQIPAQLIPVEPLPEPSRTRRFTLNHGMVPGQGMAFLINGEAYRDQPQTTVRLNDVEDWEIVNT GTMDHPFHVHVNGFQVVSRNGVPEENIAWADTVLVRVGETVKIRIAFRDFAGKTVYHCHILDHEDLGMMGQLEILPAS
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=530, Percent_Identity=27.7358490566038, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1789394, Length=499, Percent_Identity=26.4529058116232, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323703, Length=468, Percent_Identity=24.7863247863248, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321067, Length=259, Percent_Identity=25.8687258687259, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 53830; Mature: 53699
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKRREFLGLTALGATGALLWQGRNLLRSRNSSPLAAPIPEIYRSEGGSLEINLEARYE CCCCCCCEEEEEECCCCCEEEECCCHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEEECEE DVILGGEPTRNMMTYNGQIPGPRLEVRPGDRLIIHFKNSLDQPTNLHFHGLHLSPEGNQD EEEECCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCC NVFLHIEPGETFHYELEIHPQQRAGTYWYHPHHHGFVAEQLFQGLAGLIVVRGDLDELPE CEEEEEECCCEEEEEEEECCHHHCCEEEECCCCCCHHHHHHHHCCEEEEEEECCHHHCCH IRAAQEEFFVLQDFNRDRPPQGMMGSHMNLMAGREGNLITVNGLFHPEIAVTKDLVRLRL HHHCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECEECCCHHHHHHEEEEEE LNASPSRFYRLQLYGQKLMQIAGDDGAFSQPLERDELLLTPGQRAEVLIKTQDLPKTPIH ECCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCE LLNLPYQRAQIGIMGQQYNNATVAIADFTPSAPTFAPVQIPAQLIPVEPLPEPSRTRRFT EECCCHHHEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCEEEE LNHGMVPGQGMAFLINGEAYRDQPQTTVRLNDVEDWEIVNTGTMDHPFHVHVNGFQVVSR ECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCEEEEEC NGVPEENIAWADTVLVRVGETVKIRIAFRDFAGKTVYHCHILDHEDLGMMGQLEILPAS CCCCCCCCEEHEEEEEEECCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure GIKRREFLGLTALGATGALLWQGRNLLRSRNSSPLAAPIPEIYRSEGGSLEINLEARYE CCCCCCEEEEEECCCCCEEEECCCHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEEECEE DVILGGEPTRNMMTYNGQIPGPRLEVRPGDRLIIHFKNSLDQPTNLHFHGLHLSPEGNQD EEEECCCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCC NVFLHIEPGETFHYELEIHPQQRAGTYWYHPHHHGFVAEQLFQGLAGLIVVRGDLDELPE CEEEEEECCCEEEEEEEECCHHHCCEEEECCCCCCHHHHHHHHCCEEEEEEECCHHHCCH IRAAQEEFFVLQDFNRDRPPQGMMGSHMNLMAGREGNLITVNGLFHPEIAVTKDLVRLRL HHHCHHHEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEECEECCCHHHHHHEEEEEE LNASPSRFYRLQLYGQKLMQIAGDDGAFSQPLERDELLLTPGQRAEVLIKTQDLPKTPIH ECCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCE LLNLPYQRAQIGIMGQQYNNATVAIADFTPSAPTFAPVQIPAQLIPVEPLPEPSRTRRFT EECCCHHHEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCEEEE LNHGMVPGQGMAFLINGEAYRDQPQTTVRLNDVEDWEIVNTGTMDHPFHVHVNGFQVVSR ECCCCCCCCCEEEEECCCHHCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCEEEEEC NGVPEENIAWADTVLVRVGETVKIRIAFRDFAGKTVYHCHILDHEDLGMMGQLEILPAS CCCCCCCCEEHEEEEEEECCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]