Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078884

Identifier: 170078884

GI number: 170078884

Start: 2370515

End: 2371324

Strand: Reverse

Name: 170078884

Synonym: SYNPCC7002_A2288

Alternate gene names: NA

Gene position: 2371324-2370515 (Counterclockwise)

Preceding gene: 170078885

Following gene: 170078883

Centisome position: 78.83

GC content: 53.09

Gene sequence:

>810_bases
ATGGAATTTCTCGCAATCTTGATGTCCGGTTTTCTGACAGCCCTTTCCCCAGTGGGCTTGATCCTAGAGGAGGTCAGCGG
TAAACGCATTGGCGATCGCCTCCAAGCCGCAGAAACCTTTGAAGTACGGGTCGATAATGTTCCTAGTCACCAACTTCTCA
AGGGCAAAATTGACCGCGTTCAGATTGCTAGTCGTGGCGTTGAACTTTTTCCTGGCCTACGTTTTGAGGTGCTAGAACTT
GAAACCGATCCCCTCAGTTTTGACCTGGCTAAAGTTCGCAGTGGCAAACCTGGCCCCGGTGTTTTGGATCAGCCCCTCCA
GGCAGGCGTGCGCTTTGTTCTCACCGAAACTGATCTCAATCAAGCCTTAACGTCTCCACAAGTTACGGCCTTGATACAAC
CTCTCATTAATCGTCTGCTCACCCGTCCCGGCAGCACCAATCCACCCCGTTTCCAATTAGAAAATGCCACCGTCGATTTC
CTCGGCGAAAACCGTCTCCAGTTCACCGGAGAAATGTTCCAGATCAATCCCGAAACAGGCGAAGCAGAGCGGGCGACGCT
CCAACTCAGTTTTACCCTCGGCCTTGCATCTGGTAGCCAATTCCAACTCACAGACTTTGAAGGGGCAGTGAATGATCAAC
CCCTCCCTCCGCCCCTCCTTAATGGCTTTGCCCAGGGGTTTAGCCGCCGCTTCAATCTGCGGATCTTCCAAGACCGGGGT
TTAACGGCCCGCTTTCTCCAACTTCAAACCGGCGATCGCCAAATCCAGGGGGCGATGTTCATTCAGTTGGCTAACCCCAC
CCCCCAATAA

Upstream 100 bases:

>100_bases
GGCAAGCGACTGTGTCTGCGGTCAATGCGGATTTAAAATTGCTTGTCTCTTAGAAATTTTCAGCTAAAGTTAAGGACGAA
CCATCAGCCTGGGGCGCACC

Downstream 100 bases:

>100_bases
ATAACAAAATCTAATCACAGCCCTCAAAATTTTTGAGGTTTTTCTTTGCCCCAATCCATAGATATAAGAGTATAGTTTAC
CTAGATTGCATAGCCTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEFLAILMSGFLTALSPVGLILEEVSGKRIGDRLQAAETFEVRVDNVPSHQLLKGKIDRVQIASRGVELFPGLRFEVLEL
ETDPLSFDLAKVRSGKPGPGVLDQPLQAGVRFVLTETDLNQALTSPQVTALIQPLINRLLTRPGSTNPPRFQLENATVDF
LGENRLQFTGEMFQINPETGEAERATLQLSFTLGLASGSQFQLTDFEGAVNDQPLPPPLLNGFAQGFSRRFNLRIFQDRG
LTARFLQLQTGDRQIQGAMFIQLANPTPQ

Sequences:

>Translated_269_residues
MEFLAILMSGFLTALSPVGLILEEVSGKRIGDRLQAAETFEVRVDNVPSHQLLKGKIDRVQIASRGVELFPGLRFEVLEL
ETDPLSFDLAKVRSGKPGPGVLDQPLQAGVRFVLTETDLNQALTSPQVTALIQPLINRLLTRPGSTNPPRFQLENATVDF
LGENRLQFTGEMFQINPETGEAERATLQLSFTLGLASGSQFQLTDFEGAVNDQPLPPPLLNGFAQGFSRRFNLRIFQDRG
LTARFLQLQTGDRQIQGAMFIQLANPTPQ
>Mature_269_residues
MEFLAILMSGFLTALSPVGLILEEVSGKRIGDRLQAAETFEVRVDNVPSHQLLKGKIDRVQIASRGVELFPGLRFEVLEL
ETDPLSFDLAKVRSGKPGPGVLDQPLQAGVRFVLTETDLNQALTSPQVTALIQPLINRLLTRPGSTNPPRFQLENATVDF
LGENRLQFTGEMFQINPETGEAERATLQLSFTLGLASGSQFQLTDFEGAVNDQPLPPPLLNGFAQGFSRRFNLRIFQDRG
LTARFLQLQTGDRQIQGAMFIQLANPTPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29657; Mature: 29657

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLAILMSGFLTALSPVGLILEEVSGKRIGDRLQAAETFEVRVDNVPSHQLLKGKIDRV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCEE
QIASRGVELFPGLRFEVLELETDPLSFDLAKVRSGKPGPGVLDQPLQAGVRFVLTETDLN
EHHHCCHHHCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCHHHCCEEEEEEECCHH
QALTSPQVTALIQPLINRLLTRPGSTNPPRFQLENATVDFLGENRLQFTGEMFQINPETG
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEECCCCEEEECEEEEECCCCC
EAERATLQLSFTLGLASGSQFQLTDFEGAVNDQPLPPPLLNGFAQGFSRRFNLRIFQDRG
CCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCC
LTARFLQLQTGDRQIQGAMFIQLANPTPQ
CEEEEEEEECCCCEECCEEEEEECCCCCC
>Mature Secondary Structure
MEFLAILMSGFLTALSPVGLILEEVSGKRIGDRLQAAETFEVRVDNVPSHQLLKGKIDRV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCEE
QIASRGVELFPGLRFEVLELETDPLSFDLAKVRSGKPGPGVLDQPLQAGVRFVLTETDLN
EHHHCCHHHCCCCEEEEEEEECCCCCEEHHHHCCCCCCCCCCCCHHHCCEEEEEEECCHH
QALTSPQVTALIQPLINRLLTRPGSTNPPRFQLENATVDFLGENRLQFTGEMFQINPETG
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEECCCCEEEECEEEEECCCCC
EAERATLQLSFTLGLASGSQFQLTDFEGAVNDQPLPPPLLNGFAQGFSRRFNLRIFQDRG
CCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCC
LTARFLQLQTGDRQIQGAMFIQLANPTPQ
CEEEEEEEECCCCEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA