| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078846
Identifier: 170078846
GI number: 170078846
Start: 2330876
End: 2331871
Strand: Direct
Name: 170078846
Synonym: SYNPCC7002_A2250
Alternate gene names: NA
Gene position: 2330876-2331871 (Clockwise)
Preceding gene: 170078845
Following gene: 170078847
Centisome position: 77.49
GC content: 53.61
Gene sequence:
>996_bases ATGCCCGCAGTGTTGAATCGAGTCAGTCATAAGGGTATTGCAGGAATTTTGAAAGGAAAGTTATCGCGGCTCAAGCCCTA TTTGCGTTGGTTTATTGTTGGCCTGACGCTCTTTTTTTTGCTGGCAACCCTCCGGAACCATTGGCAAGAGGTAGCCCAAA TTCGTCTGGATCGTCGGGGGTGGCTCTTGGTGGGGGCAAGTATTTTAGTAACGACGTCATCCCATATATGGTCGGCATTG GTGTGGGGACGGATTCTCACGCTGTTCCGGGTGCCCCTTGGTTATGGGGAGGCGATCGCCTTATATCTGCGAACGAATAT GGCGAAGTATCTGCCGGGAAATATTTGGCATTTCTACGGGCGGATGACCCGGATTGTGGCCGTGGGGAGTCCCTGGGGGG TGGCGAGTTTAGCAGTGCTATTGGAACCGCTTTTGTTGGCGGCAGCGGCGGCGATCGCCATGGTCTTGGGGTTGGGGCTT AGCCTCGCGCAACTGGAGCAATTGCCCCTGTTAAAACTATTAGTTCCCCTAGGCTTAATCGGTGTCCTCGGTGGCATTCA TCCATACTTTTTCAATCCTGTAATTCAAAAGGTTTCCCGGGGCAAAACCCAGGATCATGACCCGGTACAGTTGAACATTT ACCCTTGGCAACCCCTGCTGGGAGAACTGGTTTTCATTGGCTTACGGGGGACGGGATTTCTTTTAACTTGGTGGGCGATC GCCCCCCTGAGTGCCTCCCAGATTCCCCAACTGCTGGGGGTCTTTAGTGGGGCGTGGTTGGCCGGATTTATTATTCCTGG GGCACCGGGGGGATTGGGGGTCTTTGAAGTGGTCGCCCTCGCCCTTTTAGAAACCGTCGGAAATACAAATGTCGGTGTTG GCAGCCTGTTAACCATCGTGGCCTTGATGCGGGGGGTCAGTATTCTGGCAGAAATTTTGCCCCTGGGAATTTGGGGTTGG CGATCACCCGTCCAAAAGTTGCCCCCAAAGCTTTGA
Upstream 100 bases:
>100_bases CCAGCAGAAAAGCCCATTTTAAATGATGTCCTAGGGCTTGCGGAAGAAGCATTGGCCCTGAGTCTCCGGGAAGGGGTGGA GAAGGCCATGAGCCTCTATA
Downstream 100 bases:
>100_bases TATAGTGAGACTCCAAAGTCTGCGCAATATTTTTTGATTGTTATGGAACCTTTACCCTTGCCTTCCCACATCCACTACGA AACGATCCTGCAAATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPAVLNRVSHKGIAGILKGKLSRLKPYLRWFIVGLTLFFLLATLRNHWQEVAQIRLDRRGWLLVGASILVTTSSHIWSAL VWGRILTLFRVPLGYGEAIALYLRTNMAKYLPGNIWHFYGRMTRIVAVGSPWGVASLAVLLEPLLLAAAAAIAMVLGLGL SLAQLEQLPLLKLLVPLGLIGVLGGIHPYFFNPVIQKVSRGKTQDHDPVQLNIYPWQPLLGELVFIGLRGTGFLLTWWAI APLSASQIPQLLGVFSGAWLAGFIIPGAPGGLGVFEVVALALLETVGNTNVGVGSLLTIVALMRGVSILAEILPLGIWGW RSPVQKLPPKL
Sequences:
>Translated_331_residues MPAVLNRVSHKGIAGILKGKLSRLKPYLRWFIVGLTLFFLLATLRNHWQEVAQIRLDRRGWLLVGASILVTTSSHIWSAL VWGRILTLFRVPLGYGEAIALYLRTNMAKYLPGNIWHFYGRMTRIVAVGSPWGVASLAVLLEPLLLAAAAAIAMVLGLGL SLAQLEQLPLLKLLVPLGLIGVLGGIHPYFFNPVIQKVSRGKTQDHDPVQLNIYPWQPLLGELVFIGLRGTGFLLTWWAI APLSASQIPQLLGVFSGAWLAGFIIPGAPGGLGVFEVVALALLETVGNTNVGVGSLLTIVALMRGVSILAEILPLGIWGW RSPVQKLPPKL >Mature_330_residues PAVLNRVSHKGIAGILKGKLSRLKPYLRWFIVGLTLFFLLATLRNHWQEVAQIRLDRRGWLLVGASILVTTSSHIWSALV WGRILTLFRVPLGYGEAIALYLRTNMAKYLPGNIWHFYGRMTRIVAVGSPWGVASLAVLLEPLLLAAAAAIAMVLGLGLS LAQLEQLPLLKLLVPLGLIGVLGGIHPYFFNPVIQKVSRGKTQDHDPVQLNIYPWQPLLGELVFIGLRGTGFLLTWWAIA PLSASQIPQLLGVFSGAWLAGFIIPGAPGGLGVFEVVALALLETVGNTNVGVGSLLTIVALMRGVSILAEILPLGIWGWR SPVQKLPPKL
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35947; Mature: 35816
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVLNRVSHKGIAGILKGKLSRLKPYLRWFIVGLTLFFLLATLRNHWQEVAQIRLDRRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WLLVGASILVTTSSHIWSALVWGRILTLFRVPLGYGEAIALYLRTNMAKYLPGNIWHFYG EEEECCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH RMTRIVAVGSPWGVASLAVLLEPLLLAAAAAIAMVLGLGLSLAQLEQLPLLKLLVPLGLI HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVLGGIHPYFFNPVIQKVSRGKTQDHDPVQLNIYPWQPLLGELVFIGLRGTGFLLTWWAI HHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHEEHCCCCCCHHHHHHHH APLSASQIPQLLGVFSGAWLAGFIIPGAPGGLGVFEVVALALLETVGNTNVGVGSLLTIV CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ALMRGVSILAEILPLGIWGWRSPVQKLPPKL HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC >Mature Secondary Structure PAVLNRVSHKGIAGILKGKLSRLKPYLRWFIVGLTLFFLLATLRNHWQEVAQIRLDRRG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC WLLVGASILVTTSSHIWSALVWGRILTLFRVPLGYGEAIALYLRTNMAKYLPGNIWHFYG EEEECCHHEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH RMTRIVAVGSPWGVASLAVLLEPLLLAAAAAIAMVLGLGLSLAQLEQLPLLKLLVPLGLI HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVLGGIHPYFFNPVIQKVSRGKTQDHDPVQLNIYPWQPLLGELVFIGLRGTGFLLTWWAI HHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHEEHCCCCCCHHHHHHHH APLSASQIPQLLGVFSGAWLAGFIIPGAPGGLGVFEVVALALLETVGNTNVGVGSLLTIV CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH ALMRGVSILAEILPLGIWGWRSPVQKLPPKL HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA