Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078841

Identifier: 170078841

GI number: 170078841

Start: 2328022

End: 2328414

Strand: Direct

Name: 170078841

Synonym: SYNPCC7002_A2245

Alternate gene names: NA

Gene position: 2328022-2328414 (Clockwise)

Preceding gene: 170078838

Following gene: 170078844

Centisome position: 77.39

GC content: 52.67

Gene sequence:

>393_bases
ATGAAACAGGCGATCGCCAAATTTTTGACCCAGCCCAAAGACCGAAAAGTTGCTGTCGGTCTCGCCCTCCTTGGTTCGGT
AACGCCCCTCTCCGGCGTCCACAAATTTTATGTCGGGCAACCAGTCTGGGGCGTTGTGTATATTCTCCTCTGGTCAACGC
CGATCCCCCAAATTGCCTGTGCCATCGAAGCGGTCTGGTACCTACTGCAAGATTTTGACTCGTTCCAAGCCCGGTTTGGT
TTAACAAAAGCTCCAGCGTCTGACCAGGCGATCGCCGCTGTCCAACAAACTGCTGCCATTGCCGAAGCGCTCCGGGAACT
CGAAAAACTCCGGGTGGAAGGTTTGATCACCGAATATGAATTTGAGCAAAAACGTCGCCAGCTACTGAGTTAA

Upstream 100 bases:

>100_bases
GGCTTGGATAAGTTGCTCTACCATAGGGGGTGAGTGTCTTCCTTAAATTTTAGTGGAGGCATTTCCCGTCGCAAAGTATG
GTTTTCCACATCTAAATGCC

Downstream 100 bases:

>100_bases
GCACTTGAATTAAGCACTGGTCTGATCTTGGGCGATCGCCTGTTGTTTAATCAATCGTTGCACCGCCATCAATGCTCGGT
TCAGTTCTACATTTTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKQAIAKFLTQPKDRKVAVGLALLGSVTPLSGVHKFYVGQPVWGVVYILLWSTPIPQIACAIEAVWYLLQDFDSFQARFG
LTKAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYEFEQKRRQLLS

Sequences:

>Translated_130_residues
MKQAIAKFLTQPKDRKVAVGLALLGSVTPLSGVHKFYVGQPVWGVVYILLWSTPIPQIACAIEAVWYLLQDFDSFQARFG
LTKAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYEFEQKRRQLLS
>Mature_130_residues
MKQAIAKFLTQPKDRKVAVGLALLGSVTPLSGVHKFYVGQPVWGVVYILLWSTPIPQIACAIEAVWYLLQDFDSFQARFG
LTKAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYEFEQKRRQLLS

Specific function: Unknown

COG id: COG2314

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14475; Mature: 14475

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAIAKFLTQPKDRKVAVGLALLGSVTPLSGVHKFYVGQPVWGVVYILLWSTPIPQIAC
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
AIEAVWYLLQDFDSFQARFGLTKAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEQKRRQLLS
HHHHHHHHCC
>Mature Secondary Structure
MKQAIAKFLTQPKDRKVAVGLALLGSVTPLSGVHKFYVGQPVWGVVYILLWSTPIPQIAC
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
AIEAVWYLLQDFDSFQARFGLTKAPASDQAIAAVQQTAAIAEALRELEKLRVEGLITEYE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEQKRRQLLS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA