| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078814
Identifier: 170078814
GI number: 170078814
Start: 2305746
End: 2306072
Strand: Reverse
Name: 170078814
Synonym: SYNPCC7002_A2216
Alternate gene names: NA
Gene position: 2306072-2305746 (Counterclockwise)
Preceding gene: 170078815
Following gene: 170078813
Centisome position: 76.66
GC content: 44.95
Gene sequence:
>327_bases GTGTACGATTTCCCTAAGTCTTACTATGGTACAGGTATGATTAACCTGACTTACGAGTACAGAGTCTATCCGACTGCCGA CCAAGCCATCAAAATGGATGAATGGTTGGACACGTGCAAGCGCGTCTATAACTACGCCTTAGCTGAACGTCGTGATTGGA TTCAGTCCCGTAAGTGCCCGATTAATGCTTGCAGTATTCAGCGGGAATTTATTTACCCAATGGATTCAGAAAAGCCGACC TATTACAGTCAAAAGCGCAATTTGACCGCCGCAAGGAAAACTAATTCTTTTCTCAAGCGGTGCATTCTCAAGTGCTTCAG GATGTGA
Upstream 100 bases:
>100_bases GGGAAGCCCCGCGTTGTATGTGAAATATCAACGTCGGGATGAGGAGCGAGCGACTGACCAGCGGGAAGCAGCAAACTCCT AGTTAAGCGTCTTAGAAAAA
Downstream 100 bases:
>100_bases TGGGCAGGCTGGAAAAGGCGTTTAATGCATTGTGGAATAGTGGGTTCGGATTCCCACGGTTTAAGAAGCGTTTTCGCAGC TTTAGCTTCCCGCAGTTGGG
Product: transposase
Products: NA
Alternate protein names: ISSoc12 Transposase; DNA-Methyltransferase
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MYDFPKSYYGTGMINLTYEYRVYPTADQAIKMDEWLDTCKRVYNYALAERRDWIQSRKCPINACSIQREFIYPMDSEKPT YYSQKRNLTAARKTNSFLKRCILKCFRM
Sequences:
>Translated_108_residues MYDFPKSYYGTGMINLTYEYRVYPTADQAIKMDEWLDTCKRVYNYALAERRDWIQSRKCPINACSIQREFIYPMDSEKPT YYSQKRNLTAARKTNSFLKRCILKCFRM >Mature_108_residues MYDFPKSYYGTGMINLTYEYRVYPTADQAIKMDEWLDTCKRVYNYALAERRDWIQSRKCPINACSIQREFIYPMDSEKPT YYSQKRNLTAARKTNSFLKRCILKCFRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13077; Mature: 13077
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDFPKSYYGTGMINLTYEYRVYPTADQAIKMDEWLDTCKRVYNYALAERRDWIQSRKCP CCCCCCCCCCCCEEEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INACSIQREFIYPMDSEKPTYYSQKRNLTAARKTNSFLKRCILKCFRM CCHHHCHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYDFPKSYYGTGMINLTYEYRVYPTADQAIKMDEWLDTCKRVYNYALAERRDWIQSRKCP CCCCCCCCCCCCEEEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC INACSIQREFIYPMDSEKPTYYSQKRNLTAARKTNSFLKRCILKCFRM CCHHHCHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA